, including all inherited members.
ACTIVATOR enum value | CLMetabReferenceGlyph | |
add(CCopasiObject *pObject, const bool &adopt=true) | CCopasiContainer | [virtual] |
addDirectDependency(const CCopasiObject *pObject) | CCopasiObject | |
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
Array enum value | CCopasiObject | [protected] |
buildUpdateSequence(const std::set< const CCopasiObject * > &objects, const std::set< const CCopasiObject * > &uptoDateObjects, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) | CCopasiObject | [static] |
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container) | CCopasiContainer | |
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL) | CCopasiContainer | |
CCopasiObject() | CCopasiObject | [protected] |
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0) | CCopasiObject | [protected] |
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL) | CCopasiObject | |
CLBase() | CLBase | [inline] |
CLBase(const CLBase &) | CLBase | [inline] |
CLBase(const SBase &) | CLBase | [inline] |
clearDirectDependencies() | CCopasiObject | |
clearRefresh() | CCopasiObject | |
CLGraphicalObject(const std::string &name="GraphicalObject", const CCopasiContainer *pParent=NULL) | CLGraphicalObject | |
CLGraphicalObject(const CLGraphicalObject &src, const CCopasiContainer *pParent=NULL) | CLGraphicalObject | |
CLGraphicalObject(const GraphicalObject &sbml, std::map< std::string, std::string > &layoutmap, const CCopasiContainer *pParent=NULL) | CLGraphicalObject | |
CLMetabReferenceGlyph(const std::string &name="MetabReferenceGlyph", const CCopasiContainer *pParent=NULL) | CLMetabReferenceGlyph | |
CLMetabReferenceGlyph(const CLMetabReferenceGlyph &src, const CCopasiContainer *pParent=NULL) | CLMetabReferenceGlyph | |
CLMetabReferenceGlyph(const SpeciesReferenceGlyph &sbml, const std::map< std::string, std::string > &modelmap, std::map< std::string, std::string > &layoutmap, const CCopasiContainer *pParent=NULL) | CLMetabReferenceGlyph | |
Container enum value | CCopasiObject | [protected] |
DataModel enum value | CCopasiObject | [protected] |
dependsOn(std::set< const CCopasiObject * > candidates, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const | CCopasiObject | |
EmptyList | CCopasiContainer | [static] |
exportToSBML(SpeciesReferenceGlyph *g, const std::map< CCopasiObject *, SBase * > &copasimodelmap, std::map< std::string, const SBase * > &sbmlIDs, const std::map< const CLBase *, const SBase * > &layoutmap) const | CLMetabReferenceGlyph | [virtual] |
CLGraphicalObject::exportToSBML(GraphicalObject *sbmlobject, const std::map< CCopasiObject *, SBase * > &copasimodelmap, std::map< std::string, const SBase * > &sbmlIDs) const | CLGraphicalObject | [virtual] |
Flag enum name | CCopasiObject | [protected] |
getAllDependencies(std::set< const CCopasiObject * > &dependencies, const std::set< const CCopasiObject * > &context) const | CCopasiObject | |
getBoundingBox() const | CLGraphicalObject | [inline] |
getBoundingBox() | CLGraphicalObject | [inline] |
getChildObjectUnits(const CCopasiObject *pObject) const | CCopasiContainer | [virtual] |
getCN() const | CCopasiObject | [virtual] |
getCurve() const | CLMetabReferenceGlyph | [inline] |
getCurve() | CLMetabReferenceGlyph | [inline] |
getDimensions() const | CLGraphicalObject | [inline] |
getDirectDependencies(const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const | CCopasiObject | [virtual] |
getHeight() const | CLGraphicalObject | [inline] |
getKey() const | CLGraphicalObject | [inline, virtual] |
getMetabGlyph() const | CLMetabReferenceGlyph | |
getMetabGlyphKey() const | CLMetabReferenceGlyph | [inline] |
getModelObject() const | CLGraphicalObject | |
getModelObjectDisplayName(bool regular=true, bool richtext=false) const | CLGraphicalObject | |
getModelObjectKey() const | CLGraphicalObject | [inline] |
getModelObjectName() const | CLGraphicalObject | |
getObject(const CCopasiObjectName &cn) const | CCopasiContainer | [virtual] |
getObjectAncestor(const std::string &type) const | CCopasiObject | |
getObjectDataModel() | CCopasiObject | |
getObjectDataModel() const | CCopasiObject | |
getObjectDisplayName(bool regular=true, bool richtext=false) const | CCopasiObject | [virtual] |
getObjectName() const | CCopasiObject | |
getObjectParent() const | CCopasiObject | |
getObjects() const | CCopasiContainer | [virtual] |
getObjectType() const | CCopasiObject | |
getPosition() const | CLGraphicalObject | [inline] |
getRefresh() const | CCopasiObject | |
getRole() const | CLMetabReferenceGlyph | [inline] |
getRoleDisplayName() const | CLMetabReferenceGlyph | [inline] |
getUnits() const | CCopasiContainer | [virtual] |
getUpdateMethod() const | CCopasiObject | |
getValueObject() const | CCopasiContainer | [virtual] |
getValuePointer() const | CCopasiObject | [virtual] |
getWidth() const | CLGraphicalObject | [inline] |
getX() const | CLGraphicalObject | [inline] |
getY() const | CLGraphicalObject | [inline] |
Gui enum value | CCopasiObject | [protected] |
hasCircularDependencies(std::set< const CCopasiObject * > &candidates, std::set< const CCopasiObject * > &verified, const std::set< const CCopasiObject * > &context) const | CCopasiObject | |
hasUpdateMethod() const | CCopasiObject | |
INHIBITOR enum value | CLMetabReferenceGlyph | |
initObjects() | CCopasiContainer | [protected] |
isArray() const | CCopasiObject | |
isContainer() const | CCopasiObject | |
isDataModel() const | CCopasiObject | |
isMatrix() const | CCopasiObject | |
isNameVector() const | CCopasiObject | |
isNonUniqueName() const | CCopasiObject | |
isReference() const | CCopasiObject | |
isRoot() const | CCopasiObject | |
isSeparator() const | CCopasiObject | |
isStaticString() const | CCopasiObject | |
isValueBool() const | CCopasiObject | |
isValueDbl() const | CCopasiObject | |
isValueInt() const | CCopasiObject | |
isValueString() const | CCopasiObject | |
isVector() const | CCopasiObject | |
Matrix enum value | CCopasiObject | [protected] |
mBBox | CLGraphicalObject | [protected] |
mObjects | CCopasiContainer | [protected] |
ModelEntity enum value | CCopasiObject | [protected] |
MODIFIER enum value | CLMetabReferenceGlyph | |
NameVector enum value | CCopasiObject | [protected] |
NonUniqueName enum value | CCopasiObject | [protected] |
objectMap typedef | CCopasiContainer | |
operator<<(std::ostream &os, const CLMetabReferenceGlyph &g) | CLMetabReferenceGlyph | [friend] |
CLGraphicalObject::operator<<(std::ostream &os, const CLGraphicalObject &g) | CLGraphicalObject | [friend] |
CCopasiContainer::operator<<(std::ostream &os, const CCopasiObject &o) | CCopasiObject | [friend] |
operator=(const CLMetabReferenceGlyph &rhs) | CLMetabReferenceGlyph | |
CLGraphicalObject::operator=(const CLGraphicalObject &rhs) | CLGraphicalObject | |
print(std::ostream *ostream) const | CLMetabReferenceGlyph | [virtual] |
PRODUCT enum value | CLMetabReferenceGlyph | |
Reference enum value | CCopasiObject | [protected] |
remove(CCopasiObject *pObject) | CCopasiContainer | [virtual] |
removeDirectDependency(const CCopasiObject *pObject) | CCopasiObject | |
Role enum name | CLMetabReferenceGlyph | |
RoleName | CLMetabReferenceGlyph | [static] |
Root enum value | CCopasiObject | [protected] |
Separator enum value | CCopasiObject | [protected] |
setBoundingBox(const CLBoundingBox &bb) | CLGraphicalObject | [inline] |
setCurve(const CLCurve &c) | CLMetabReferenceGlyph | [inline] |
setDimensions(const CLDimensions &d) | CLGraphicalObject | [inline] |
setDirectDependencies(const std::set< const CCopasiObject * > &directDependencies) | CCopasiObject | |
setHeight(const C_FLOAT64 &h) | CLGraphicalObject | [inline] |
setMetabGlyphKey(const std::string &k) | CLMetabReferenceGlyph | [inline] |
setModelObjectKey(const std::string &k) | CLGraphicalObject | [inline] |
setObjectName(const std::string &name) | CCopasiObject | |
setObjectParent(const CCopasiContainer *pParent) | CCopasiObject | [virtual] |
setObjectValue(const C_FLOAT64 &value) | CCopasiObject | |
setObjectValue(const C_INT32 &value) | CCopasiObject | |
setObjectValue(const bool &value) | CCopasiObject | |
setPosition(const CLPoint &p) | CLGraphicalObject | [inline] |
setRefresh(CType *pType, void(CType::*method)(void)) | CCopasiObject | [inline] |
setRenameHandler(CRenameHandler *rh) | CCopasiObject | [inline, static] |
setRole(Role r) | CLMetabReferenceGlyph | [inline] |
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &)) | CCopasiObject | [inline] |
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &)) | CCopasiObject | [inline] |
setUpdateMethod(CType *pType, void(CType::*method)(const bool &)) | CCopasiObject | [inline] |
setWidth(const C_FLOAT64 &w) | CLGraphicalObject | [inline] |
setX(const C_FLOAT64 &x) | CLGraphicalObject | [inline] |
setY(const C_FLOAT64 &y) | CLGraphicalObject | [inline] |
SIDEPRODUCT enum value | CLMetabReferenceGlyph | |
SIDESUBSTRATE enum value | CLMetabReferenceGlyph | |
smpRenameHandler | CCopasiObject | [protected, static] |
StaticString enum value | CCopasiObject | [protected] |
SUBSTRATE enum value | CLMetabReferenceGlyph | |
UNDEFINED enum value | CLMetabReferenceGlyph | |
ValueBool enum value | CCopasiObject | [protected] |
ValueDbl enum value | CCopasiObject | [protected] |
ValueInt enum value | CCopasiObject | [protected] |
ValueString enum value | CCopasiObject | [protected] |
Vector enum value | CCopasiObject | [protected] |
XMLRole | CLMetabReferenceGlyph | [static] |
~CCopasiContainer() | CCopasiContainer | [virtual] |
~CCopasiObject() | CCopasiObject | [virtual] |
~CLGraphicalObject() | CLGraphicalObject | |