copasi API  0.1
CLayout Member List
This is the complete list of members for CLayout, including all inherited members.
add(CCopasiObject *pObject, const bool &adopt=true)CCopasiContainer [virtual]
addCompartmentGlyph(CLCompartmentGlyph *glyph)CLayout
addDirectDependency(const CCopasiObject *pObject)CCopasiObject
addGraphicalObject(CLGraphicalObject *glyph)CLayout
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainer [inline, protected]
addMetaboliteGlyph(CLMetabGlyph *glyph)CLayout
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainer [inline, protected]
addReactionGlyph(CLReactionGlyph *glyph)CLayout
addTextGlyph(CLTextGlyph *glyph)CLayout
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainer [inline, protected]
Array enum valueCCopasiObject [protected]
buildUpdateSequence(const std::set< const CCopasiObject * > &objects, const std::set< const CCopasiObject * > &uptoDateObjects, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >())CCopasiObject [static]
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)CCopasiContainer
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)CCopasiContainer
CCopasiObject()CCopasiObject [protected]
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)CCopasiObject [protected]
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL)CCopasiObject
CLayout(const std::string &name="Layout", const CCopasiContainer *pParent=NULL)CLayout
CLayout(const CLayout &src, const CCopasiContainer *pParent=NULL)CLayout
CLayout(const Layout &sbml, std::map< std::string, std::string > &layoutmap, const CCopasiContainer *pParent=NULL)CLayout
CLBase()CLBase [inline]
CLBase(const CLBase &)CLBase [inline]
CLBase(const SBase &)CLBase [inline]
clearDirectDependencies()CCopasiObject
clearRefresh()CCopasiObject
Container enum valueCCopasiObject [protected]
DataModel enum valueCCopasiObject [protected]
dependsOn(std::set< const CCopasiObject * > candidates, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const CCopasiObject
EmptyListCCopasiContainer [static]
exportToDotFile(std::ostream &os) const CLayout
exportToSBML(Layout *layout, const std::map< CCopasiObject *, SBase * > &copasimodelmap, std::map< std::string, const SBase * > &sbmlIDs) const CLayout
Flag enum nameCCopasiObject [protected]
getAllDependencies(std::set< const CCopasiObject * > &dependencies, const std::set< const CCopasiObject * > &context) const CCopasiObject
getChildObjectUnits(const CCopasiObject *pObject) const CCopasiContainer [virtual]
getCN() const CCopasiObject [virtual]
getDimensions() const CLayout [inline]
getDirectDependencies(const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const CCopasiObject [virtual]
getKey() const CLayout [inline, virtual]
getListOfCompartmentGlyphs() const CLayout [inline]
getListOfGraphicalObjects() const CLayout [inline]
getListOfMetaboliteGlyphs() const CLayout [inline]
getListOfReactionGlyphs() const CLayout [inline]
getListOfTextGlyphs() const CLayout [inline]
getObject(const CCopasiObjectName &cn) const CCopasiContainer [virtual]
getObjectAncestor(const std::string &type) const CCopasiObject
getObjectDataModel()CCopasiObject
getObjectDataModel() const CCopasiObject
getObjectDisplayName(bool regular=true, bool richtext=false) const CCopasiObject [virtual]
getObjectName() const CCopasiObject
getObjectParent() const CCopasiObject
getObjects() const CCopasiContainer [virtual]
getObjectType() const CCopasiObject
getRefresh() const CCopasiObject
getUnits() const CCopasiContainer [virtual]
getUpdateMethod() const CCopasiObject
getValueObject() const CCopasiContainer [virtual]
getValuePointer() const CCopasiObject [virtual]
Gui enum valueCCopasiObject [protected]
hasCircularDependencies(std::set< const CCopasiObject * > &candidates, std::set< const CCopasiObject * > &verified, const std::set< const CCopasiObject * > &context) const CCopasiObject
hasUpdateMethod() const CCopasiObject
initObjects()CCopasiContainer [protected]
isArray() const CCopasiObject
isContainer() const CCopasiObject
isDataModel() const CCopasiObject
isMatrix() const CCopasiObject
isNameVector() const CCopasiObject
isNonUniqueName() const CCopasiObject
isReference() const CCopasiObject
isRoot() const CCopasiObject
isSeparator() const CCopasiObject
isStaticString() const CCopasiObject
isValueBool() const CCopasiObject
isValueDbl() const CCopasiObject
isValueInt() const CCopasiObject
isValueString() const CCopasiObject
isVector() const CCopasiObject
Matrix enum valueCCopasiObject [protected]
mDimensionsCLayout [protected]
mKeyCLayout [protected]
mObjectsCCopasiContainer [protected]
ModelEntity enum valueCCopasiObject [protected]
mvCompartmentsCLayout [protected]
mvGraphicalObjectsCLayout [protected]
mvLabelsCLayout [protected]
mvMetabsCLayout [protected]
mvReactionsCLayout [protected]
NameVector enum valueCCopasiObject [protected]
NonUniqueName enum valueCCopasiObject [protected]
objectMap typedefCCopasiContainer
operator<<(std::ostream &os, const CLayout &g)CLayout [friend]
CCopasiContainer::operator<<(std::ostream &os, const CCopasiObject &o)CCopasiObject [friend]
print(std::ostream *ostream) const CLayout [virtual]
Reference enum valueCCopasiObject [protected]
remove(CCopasiObject *pObject)CCopasiContainer [virtual]
removeDirectDependency(const CCopasiObject *pObject)CCopasiObject
Root enum valueCCopasiObject [protected]
scale(const double &scaleFactor)CLayout [inline, virtual]
Separator enum valueCCopasiObject [protected]
setDimensions(const CLDimensions &d)CLayout [inline]
setDirectDependencies(const std::set< const CCopasiObject * > &directDependencies)CCopasiObject
setObjectName(const std::string &name)CCopasiObject
setObjectParent(const CCopasiContainer *pParent)CCopasiObject [virtual]
setObjectValue(const C_FLOAT64 &value)CCopasiObject
setObjectValue(const C_INT32 &value)CCopasiObject
setObjectValue(const bool &value)CCopasiObject
setRefresh(CType *pType, void(CType::*method)(void))CCopasiObject [inline]
setRenameHandler(CRenameHandler *rh)CCopasiObject [inline, static]
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &))CCopasiObject [inline]
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &))CCopasiObject [inline]
setUpdateMethod(CType *pType, void(CType::*method)(const bool &))CCopasiObject [inline]
smpRenameHandlerCCopasiObject [protected, static]
StaticString enum valueCCopasiObject [protected]
ValueBool enum valueCCopasiObject [protected]
ValueDbl enum valueCCopasiObject [protected]
ValueInt enum valueCCopasiObject [protected]
ValueString enum valueCCopasiObject [protected]
Vector enum valueCCopasiObject [protected]
writeDotEdge(std::ostream &os, const std::string &id1, const std::string &id2, int t=0) const CLayout [protected]
writeDotNode(std::ostream &os, const std::string &id, const std::string &label, int t=0) const CLayout [protected]
~CCopasiContainer()CCopasiContainer [virtual]
~CCopasiObject()CCopasiObject [virtual]
~CLayout()CLayout
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