copasi API  0.1
CMathModel Member List
This is the complete list of members for CMathModel, including all inherited members.
add(CCopasiObject *pObject, const bool &adopt=true)CCopasiContainer [virtual]
addDirectDependency(const CCopasiObject *pObject)CCopasiObject
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainer [inline, protected]
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainer [inline, protected]
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)CCopasiContainer [inline, protected]
applyInitialValues()CMathModel
Array enum valueCCopasiObject [protected]
buildDependendRefreshList(const std::set< const CCopasiObject * > &changedObjects) const CMathModel
buildRequiredRefreshList(const std::set< const CCopasiObject * > &requiredObjects) const CMathModel
buildUpdateSequence(const std::set< const CCopasiObject * > &objects, const std::set< const CCopasiObject * > &uptoDateObjects, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >())CCopasiObject [static]
calculateRootDerivatives(CVector< C_FLOAT64 > &rootDerivatives)CMathModel
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)CCopasiContainer
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)CCopasiContainer
CCopasiObject()CCopasiObject [protected]
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)CCopasiObject [protected]
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL)CCopasiObject
clearDirectDependencies()CCopasiObject
clearRefresh()CCopasiObject
CMathModel(const CCopasiContainer *pParent=NULL)CMathModel
CMathModel(const CMathModel &src, const CCopasiContainer *pParent=NULL)CMathModel
compile(CModel *pModel)CMathModel
Container enum valueCCopasiObject [protected]
DataModel enum valueCCopasiObject [protected]
dependsOn(std::set< const CCopasiObject * > candidates, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const CCopasiObject
EmptyListCCopasiContainer [static]
evaluateRoots(CVectorCore< C_FLOAT64 > &rootValues, const bool &ignoreDiscrete)CMathModel
Flag enum nameCCopasiObject [protected]
getAllDependencies(std::set< const CCopasiObject * > &dependencies, const std::set< const CCopasiObject * > &context) const CCopasiObject
getChildObjectUnits(const CCopasiObject *pObject) const CCopasiContainer [virtual]
getCN() const CCopasiObject [virtual]
getDirectDependencies(const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const CCopasiObject [virtual]
getInitialTime() const CMathModel
getKey() const CCopasiObject [virtual]
getNumRoots() const CMathModel
getObject(const CCopasiObjectName &cn) const CCopasiContainer [virtual]
getObjectAncestor(const std::string &type) const CCopasiObject
getObjectDataModel()CCopasiObject
getObjectDataModel() const CCopasiObject
getObjectDisplayName(bool regular=true, bool richtext=false) const CCopasiObject [virtual]
getObjectName() const CCopasiObject
getObjectParent() const CCopasiObject
getObjects() const CCopasiContainer [virtual]
getObjectType() const CCopasiObject
getProcessQueueExecutionTime() const CMathModel
getRefresh() const CCopasiObject
getRootFinders() const CMathModel
getUnits() const CCopasiContainer [virtual]
getUpdateMethod() const CCopasiObject
getValueObject() const CCopasiContainer [virtual]
getValuePointer() const CCopasiObject [virtual]
Gui enum valueCCopasiObject [protected]
hasCircularDependencies(std::set< const CCopasiObject * > &candidates, std::set< const CCopasiObject * > &verified, const std::set< const CCopasiObject * > &context) const CCopasiObject
hasUpdateMethod() const CCopasiObject
initObjects()CCopasiContainer [protected]
isArray() const CCopasiObject
isContainer() const CCopasiObject
isDataModel() const CCopasiObject
isMatrix() const CCopasiObject
isNameVector() const CCopasiObject
isNonUniqueName() const CCopasiObject
isReference() const CCopasiObject
isRoot() const CCopasiObject
isSeparator() const CCopasiObject
isStaticString() const CCopasiObject
isValueBool() const CCopasiObject
isValueDbl() const CCopasiObject
isValueInt() const CCopasiObject
isValueString() const CCopasiObject
isVector() const CCopasiObject
Matrix enum valueCCopasiObject [protected]
mObjectsCCopasiContainer [protected]
ModelEntity enum valueCCopasiObject [protected]
NameVector enum valueCCopasiObject [protected]
NonUniqueName enum valueCCopasiObject [protected]
objectMap typedefCCopasiContainer
operator<<(std::ostream &os, const CCopasiObject &o)CCopasiObject [friend]
print(std::ostream *ostream) const CCopasiObject [virtual]
processQueue(const C_FLOAT64 &time, const bool &equality, CProcessQueue::resolveSimultaneousAssignments pResolveSimultaneousAssignments)CMathModel
processRoots(const C_FLOAT64 &time, const bool &equality, const CVector< C_INT > &roots)CMathModel
Reference enum valueCCopasiObject [protected]
remove(CCopasiObject *pObject)CCopasiContainer [virtual]
removeDirectDependency(const CCopasiObject *pObject)CCopasiObject
Root enum valueCCopasiObject [protected]
Separator enum valueCCopasiObject [protected]
setDirectDependencies(const std::set< const CCopasiObject * > &directDependencies)CCopasiObject
setObjectName(const std::string &name)CCopasiObject
setObjectParent(const CCopasiContainer *pParent)CCopasiObject [virtual]
setObjectValue(const C_FLOAT64 &value)CCopasiObject
setObjectValue(const C_INT32 &value)CCopasiObject
setObjectValue(const bool &value)CCopasiObject
setRefresh(CType *pType, void(CType::*method)(void))CCopasiObject [inline]
setRenameHandler(CRenameHandler *rh)CCopasiObject [inline, static]
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &))CCopasiObject [inline]
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &))CCopasiObject [inline]
setUpdateMethod(CType *pType, void(CType::*method)(const bool &))CCopasiObject [inline]
smpRenameHandlerCCopasiObject [protected, static]
StaticString enum valueCCopasiObject [protected]
ValueBool enum valueCCopasiObject [protected]
ValueDbl enum valueCCopasiObject [protected]
ValueInt enum valueCCopasiObject [protected]
ValueString enum valueCCopasiObject [protected]
Vector enum valueCCopasiObject [protected]
~CCopasiContainer()CCopasiContainer [virtual]
~CCopasiObject()CCopasiObject [virtual]
~CMathModel()CMathModel [virtual]
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