, including all inherited members.
add(CCopasiObject *pObject, const bool &adopt=true) | CCopasiContainer | [virtual] |
addDirectDependency(const CCopasiObject *pObject) | CCopasiObject | |
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
Array enum value | CCopasiObject | [protected] |
buildUpdateSequence(const std::set< const CCopasiObject * > &objects, const std::set< const CCopasiObject * > &uptoDateObjects, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) | CCopasiObject | [static] |
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container) | CCopasiContainer | |
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL) | CCopasiContainer | |
CCopasiObject() | CCopasiObject | [protected] |
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0) | CCopasiObject | [protected] |
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL) | CCopasiObject | |
CCopasiTask(const std::string &name="NoName", const CCopasiContainer *pParent=NULL, const std::string &type="Task") | CCopasiTask | |
CCopasiTask(const Type &taskType, const CCopasiContainer *pParent=NULL, const std::string &type="Task") | CCopasiTask | |
CCopasiTask(const CCopasiTask &src, const CCopasiContainer *pParent=NULL) | CCopasiTask | |
cleanup() | CScanTask | |
clearDirectDependencies() | CCopasiObject | |
clearRefresh() | CCopasiObject | |
Container enum value | CCopasiObject | [protected] |
crosssection enum value | CCopasiTask | |
CScanTask(const CCopasiContainer *pParent=NULL) | CScanTask | |
CScanTask(const CScanTask &src, const CCopasiContainer *pParent=NULL) | CScanTask | |
DataModel enum value | CCopasiObject | [protected] |
dependsOn(std::set< const CCopasiObject * > candidates, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const | CCopasiObject | |
EmptyList | CCopasiContainer | [static] |
eOutputFlagBase enum name | CCopasiTask | |
FINISH enum value | CCopasiTask | |
Flag enum name | CCopasiObject | [protected] |
fluxMode enum value | CCopasiTask | |
getAllDependencies(std::set< const CCopasiObject * > &dependencies, const std::set< const CCopasiObject * > &context) const | CCopasiObject | |
getCallBack() const | CCopasiTask | |
getChildObjectUnits(const CCopasiObject *pObject) const | CCopasiContainer | [virtual] |
getCN() const | CCopasiObject | [virtual] |
getDescription() const | CCopasiTask | |
getDirectDependencies(const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const | CCopasiObject | [virtual] |
getKey() const | CCopasiTask | [virtual] |
getMethod() | CCopasiTask | |
getMethod() const | CCopasiTask | |
getObject(const CCopasiObjectName &cn) const | CCopasiContainer | [virtual] |
getObjectAncestor(const std::string &type) const | CCopasiObject | |
getObjectDataModel() | CCopasiObject | |
getObjectDataModel() const | CCopasiObject | |
getObjectDisplayName(bool regular=true, bool richtext=false) const | CCopasiObject | [virtual] |
getObjectName() const | CCopasiObject | |
getObjectParent() const | CCopasiObject | |
getObjects() const | CCopasiContainer | [virtual] |
getObjectType() const | CCopasiObject | |
getOutputHandler() const | CCopasiTask | |
getOutputMode() const | CCopasiTask | [inline] |
getProblem() | CCopasiTask | |
getProblem() const | CCopasiTask | |
getRefresh() const | CCopasiObject | |
getReport() | CCopasiTask | |
getResult() const | CCopasiTask | |
getSliders() | CCopasiTask | |
getType() const | CCopasiTask | |
getUnits() const | CCopasiContainer | [virtual] |
getUpdateMethod() const | CCopasiObject | |
getValueObject() const | CCopasiContainer | [virtual] |
getValuePointer() const | CCopasiObject | [virtual] |
Gui enum value | CCopasiObject | [protected] |
hasCircularDependencies(std::set< const CCopasiObject * > &candidates, std::set< const CCopasiObject * > &verified, const std::set< const CCopasiObject * > &context) const | CCopasiObject | |
hasUpdateMethod() const | CCopasiObject | |
initialize(const OutputFlag &of, COutputHandler *pOutputHandler, std::ostream *pOstream) | CScanTask | [virtual] |
INITIALIZE enum value | CCopasiTask | |
initSubtask(const OutputFlag &of, COutputHandler *pOutputHandler, std::ostream *pOstream) | CScanTask | [protected] |
isArray() const | CCopasiObject | |
isContainer() const | CCopasiObject | |
isDataModel() const | CCopasiObject | |
isMatrix() const | CCopasiObject | |
isNameVector() const | CCopasiObject | |
isNonUniqueName() const | CCopasiObject | |
isReference() const | CCopasiObject | |
isRoot() const | CCopasiObject | |
isScheduled() const | CCopasiTask | |
isSeparator() const | CCopasiObject | |
isStaticString() const | CCopasiObject | |
isUpdateModel() const | CCopasiTask | |
isValidMethod(const unsigned C_INT32 &method, const unsigned C_INT32 *validMethods) | CCopasiTask | [static] |
isValueBool() const | CCopasiObject | |
isValueDbl() const | CCopasiObject | |
isValueInt() const | CCopasiObject | |
isValueString() const | CCopasiObject | |
isVector() const | CCopasiObject | |
load(CReadConfig &configBuffer) | CScanTask | |
lyap enum value | CCopasiTask | |
Matrix enum value | CCopasiObject | [protected] |
mca enum value | CCopasiTask | |
mDescription | CCopasiTask | [protected] |
mDoOutput | CCopasiTask | [protected] |
mObjects | CCopasiContainer | [protected] |
ModelEntity enum value | CCopasiObject | [protected] |
moieties enum value | CCopasiTask | |
mOutputCounter | CCopasiTask | [protected] |
mpCallBack | CCopasiTask | [protected] |
mpInitialState | CCopasiTask | [protected] |
mpMethod | CCopasiTask | [protected] |
mpOutputHandler | CCopasiTask | [protected] |
mpProblem | CCopasiTask | [protected] |
mpSliders | CCopasiTask | [protected] |
mReport | CCopasiTask | [protected] |
mResult | CCopasiTask | [protected] |
mScheduled | CCopasiTask | [protected] |
mType | CCopasiTask | [protected] |
mUpdateModel | CCopasiTask | [protected] |
NameVector enum value | CCopasiObject | [protected] |
NO_OUTPUT enum value | CCopasiTask | |
NonUniqueName enum value | CCopasiObject | [protected] |
objectMap typedef | CCopasiContainer | |
ONLY_TIME_SERIES enum value | CCopasiTask | |
operator<<(std::ostream &os, const CCopasiObject &o) | CCopasiObject | [friend] |
optimization enum value | CCopasiTask | |
output(const COutputInterface::Activity &activity) | CCopasiTask | [virtual] |
OUTPUT enum value | CCopasiTask | |
OUTPUT_COMPLETE enum value | CCopasiTask | |
OutputFlag enum name | CCopasiTask | |
outputSeparatorCallback(bool isLast=false) | CScanTask | |
parameterFitting enum value | CCopasiTask | |
PLOT enum value | CCopasiTask | |
print(std::ostream *ostream) const | CCopasiObject | [virtual] |
process(const bool &useInitialValues) | CScanTask | [virtual] |
processCallback() | CScanTask | |
Reference enum value | CCopasiObject | [protected] |
remove(CCopasiObject *pObject) | CCopasiContainer | [virtual] |
removeDirectDependency(const CCopasiObject *pObject) | CCopasiObject | |
REPORT enum value | CCopasiTask | |
restore() | CCopasiTask | [virtual] |
Root enum value | CCopasiObject | [protected] |
scan enum value | CCopasiTask | |
sens enum value | CCopasiTask | |
separate(const COutputInterface::Activity &activity) | CCopasiTask | [virtual] |
Separator enum value | CCopasiObject | [protected] |
setCallBack(CProcessReport *pCallBack) | CCopasiTask | [virtual] |
setDirectDependencies(const std::set< const CCopasiObject * > &directDependencies) | CCopasiObject | |
setMethodType(const int &type) | CCopasiTask | [virtual] |
setObjectName(const std::string &name) | CCopasiObject | |
setObjectParent(const CCopasiContainer *pParent) | CCopasiObject | [virtual] |
setObjectValue(const C_FLOAT64 &value) | CCopasiObject | |
setObjectValue(const C_INT32 &value) | CCopasiObject | |
setObjectValue(const bool &value) | CCopasiObject | |
setRefresh(CType *pType, void(CType::*method)(void)) | CCopasiObject | [inline] |
setRenameHandler(CRenameHandler *rh) | CCopasiObject | [inline, static] |
setScheduled(const bool &scheduled) | CCopasiTask | |
setType(const Type &type) | CCopasiTask | |
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &)) | CCopasiObject | [inline] |
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &)) | CCopasiObject | [inline] |
setUpdateMethod(CType *pType, void(CType::*method)(const bool &)) | CCopasiObject | [inline] |
setUpdateModel(const bool &updateModel) | CCopasiTask | |
smpRenameHandler | CCopasiObject | [protected, static] |
StaticString enum value | CCopasiObject | [protected] |
steadyState enum value | CCopasiTask | |
STREAM enum value | CCopasiTask | |
TIME_SERIES enum value | CCopasiTask | |
timeCourse enum value | CCopasiTask | |
tssAnalysis enum value | CCopasiTask | |
Type enum name | CCopasiTask | |
TypeName | CCopasiTask | [static] |
unset enum value | CCopasiTask | |
updateMatrices() | CCopasiTask | [inline, virtual] |
ValidMethods | CCopasiTask | [static] |
ValueBool enum value | CCopasiObject | [protected] |
ValueDbl enum value | CCopasiObject | [protected] |
ValueInt enum value | CCopasiObject | [protected] |
ValueString enum value | CCopasiObject | [protected] |
Vector enum value | CCopasiObject | [protected] |
XMLType | CCopasiTask | [static] |
~CCopasiContainer() | CCopasiContainer | [virtual] |
~CCopasiObject() | CCopasiObject | [virtual] |
~CCopasiTask() | CCopasiTask | [virtual] |
~CScanTask() | CScanTask | |