CStepMatrix Class Reference

#include <CStepMatrix.h>

Inheritance diagram for CStepMatrix:

List of all members.

Public Types
typedef CStepMatrixColumn *const *	const_iterator
Public Member Functions
	CStepMatrix (size_t rows)
	CStepMatrix (CMatrix< C_INT64 > &nullspaceMatrix)
	~CStepMatrix ()
const_iterator	begin () const
const_iterator	end () const
void	add (CStepMatrixColumn *pColumn)
void	convertRow ()
size_t	getFirstUnconvertedRow () const
size_t	getNumUnconvertedRows () const
CStepMatrixColumn *	addColumn (const CZeroSet &set, const CStepMatrixColumn *pPositive, const CStepMatrixColumn *pNegative)
void	removeColumn (CStepMatrixColumn *pColumn)
bool	splitColumns (std::vector< CStepMatrixColumn * > &PositiveColumns, std::vector< CStepMatrixColumn * > &NegativeColumns, std::vector< CStepMatrixColumn * > &NullColumns)
void	removeInvalidColumns (std::vector< CStepMatrixColumn * > &invalidColumns)
void	compact ()
void	getAllUnsetBitIndexes (const CStepMatrixColumn *pColumn, CVector< size_t > &indexes) const
void	getUnsetBitIndexes (const CStepMatrixColumn *pColumn, CVector< size_t > &indexes) const
Friends
std::ostream &	operator<< (std::ostream &, const CStepMatrix &)

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Member Typedef Documentation

typedef CStepMatrixColumn* const* CStepMatrix::const_iterator

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Constructor & Destructor Documentation

CStepMatrix::CStepMatrix

(

size_t

rows

)

CStepMatrix::CStepMatrix

(

CMatrix< C_INT64 > &

nullspaceMatrix

)

CStepMatrix::~CStepMatrix

(

)

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Member Function Documentation

void CStepMatrix::add

(

CStepMatrixColumn *

pColumn

)

[inline]

CStepMatrixColumn * CStepMatrix::addColumn	(	const CZeroSet &	set,
		const CStepMatrixColumn *	pPositive,
		const CStepMatrixColumn *	pNegative
	)

Add the linear combination of the two columns to the step matrix if appropriate and remove columns if necessary.

Parameters:

const	CZeroSet & set
const	CStepMatrixColumn * pPositive
const	CStepMatrixColumn * pNegative

Returns:

CStepMatrixColumn * pColumn

CStepMatrix::const_iterator CStepMatrix::begin

(

)

const

void CStepMatrix::compact

(

)

void CStepMatrix::convertRow

(

)

CStepMatrix::const_iterator CStepMatrix::end

(

)

const

void CStepMatrix::getAllUnsetBitIndexes	(	const CStepMatrixColumn *	pColumn,
		CVector< size_t > &	indexes
	)		const

size_t CStepMatrix::getFirstUnconvertedRow

(

)

const

size_t CStepMatrix::getNumUnconvertedRows

(

)

const

void CStepMatrix::getUnsetBitIndexes	(	const CStepMatrixColumn *	pColumn,
		CVector< size_t > &	indexes
	)		const

void CStepMatrix::removeColumn

(

CStepMatrixColumn *

pColumn

)

void CStepMatrix::removeInvalidColumns

(

std::vector< CStepMatrixColumn * > &

invalidColumns

)

bool CStepMatrix::splitColumns	(	std::vector< CStepMatrixColumn * > &	PositiveColumns,
		std::vector< CStepMatrixColumn * > &	NegativeColumns,
		std::vector< CStepMatrixColumn * > &	NullColumns
	)

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Friends And Related Function Documentation

std::ostream& operator<<	(	std::ostream &	os,
		const CStepMatrix &	m
	)		[friend]

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The documentation for this class was generated from the following files:

• copasi/elementaryFluxModes/CStepMatrix.h
• copasi/elementaryFluxModes/CStepMatrix.cpp