copasi/objective_functions.h File Reference

#include "copasi_api.h"

Go to the source code of this file.

Classes
struct	CopasiAPIOptimizationFunctionPtr
Functions
double	fit_time_course (copasi_model, tc_matrix)
double	fit_input_output (copasi_model, tc_matrix)
double	bimodality (copasi_model, tc_matrix)
double	oscillation (copasi_model, tc_matrix)
double	nonmonotonicity (copasi_model, tc_matrix)
double	adaptive_response (copasi_model, tc_matrix)
double	coefficient_of_variation (copasi_model, tc_matrix)
Variables
CopasiAPIOptimizationFunction	CopasiAPIOptimizationFunctions []

---

Function Documentation

double adaptive_response	(	copasi_model	model,
		tc_matrix	target
	)

double bimodality	(	copasi_model	model,
		tc_matrix	input
	)

double coefficient_of_variation	(	copasi_model	model,
		tc_matrix	target
	)

double fit_input_output	(	copasi_model	,
		tc_matrix
	)

double fit_time_course	(	copasi_model	,
		tc_matrix
	)

double nonmonotonicity	(	copasi_model	model,
		tc_matrix	target
	)

double oscillation	(	copasi_model	model,
		tc_matrix	target
	)

---

Variable Documentation

CopasiAPIOptimizationFunction CopasiAPIOptimizationFunctions[]

Initial value:

 
{
        {"fit time-course data", -1, &fit_time_course},
        {"fit input-output data", -1, &fit_input_output},
        {"bimodal", 1, &bimodality},
        {"oscillation", 1, &oscillation},
        {"non-monotonicity", -1, &nonmonotonicity},
        {"adaptive response", -1, &adaptive_response},
        {"low coefficient of variation", -1, &coefficient_of_variation},
        0
}