CLReactionGlyph Class Reference

#include <CLReactionGlyph.h>

Inheritance diagram for CLReactionGlyph:

List of all members.

Public Member Functions
	CLReactionGlyph (const std::string &name="ReactionGlyph", const CCopasiContainer *pParent=NULL)
	CLReactionGlyph (const CLReactionGlyph &src, const CCopasiContainer *pParent=NULL)
	CLReactionGlyph (const ReactionGlyph &sbml, const std::map< std::string, std::string > &modelmap, std::map< std::string, std::string > &layoutmap, const CCopasiContainer *pParent=NULL)
CLReactionGlyph &	operator= (const CLReactionGlyph &rhs)
const CCopasiVector < CLMetabReferenceGlyph > &	getListOfMetabReferenceGlyphs () const
void	addMetabReferenceGlyph (CLMetabReferenceGlyph *glyph)
const CLCurve &	getCurve () const
CLCurve &	getCurve ()
void	setCurve (const CLCurve &c)
virtual void	exportToSBML (ReactionGlyph *g, const std::map< CCopasiObject *, SBase * > &copasimodelmap, std::map< std::string, const SBase * > &sbmlIDs, std::map< const CLBase *, const SBase * > &layoutmap) const
void	print (std::ostream *ostream) const
Friends
std::ostream &	operator<< (std::ostream &os, const CLReactionGlyph &g)

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Detailed Description

Graphical representation of a reaction

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Constructor & Destructor Documentation

CLReactionGlyph::CLReactionGlyph	(	const std::string &	name = "ReactionGlyph",
		const CCopasiContainer *	pParent = NULL
	)

CLReactionGlyph::CLReactionGlyph	(	const CLReactionGlyph &	src,
		const CCopasiContainer *	pParent = NULL
	)

CLReactionGlyph::CLReactionGlyph	(	const ReactionGlyph &	sbml,
		const std::map< std::string, std::string > &	modelmap,
		std::map< std::string, std::string > &	layoutmap,
		const CCopasiContainer *	pParent = NULL
	)

constructor from libsbml object

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Member Function Documentation

void CLReactionGlyph::addMetabReferenceGlyph

(

CLMetabReferenceGlyph *

glyph

)

add Glyph to reaction glyph. The reaction glyph takes ownership of the glyph.

void CLReactionGlyph::exportToSBML	(	ReactionGlyph *	g,
		const std::map< CCopasiObject *, SBase * > &	copasimodelmap,
		std::map< std::string, const SBase * > &	sbmlIDs,
		std::map< const CLBase *, const SBase * > &	layoutmap
	)		const [virtual]

This method writes the information of the copasi layout object into the corresponding sbml object layoutmap contains a map from copasi layout objects to libsbml layout objects. the exported metab reference glyphs will be added.

const CLCurve& CLReactionGlyph::getCurve

(

)

const [inline]

CLCurve& CLReactionGlyph::getCurve

(

)

[inline]

const CCopasiVector<CLMetabReferenceGlyph>& CLReactionGlyph::getListOfMetabReferenceGlyphs

(

)

const [inline]

CLReactionGlyph & CLReactionGlyph::operator=

(

const CLReactionGlyph &

rhs

)

assignment operator. makes a deep copy

void CLReactionGlyph::print

(

std::ostream *

ostream

)

const [virtual]

This is the output method for any object. The default implementation provided with CCopasiObject uses the ostream operator<< of the object to print the object.To override this default behavior one needs to reimplement the virtual print function.

Parameters:

std::ostream

* ostream

Reimplemented from CLGraphicalObject.

void CLReactionGlyph::setCurve

(

const CLCurve &

c

)

[inline]

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Friends And Related Function Documentation

std::ostream& operator<<	(	std::ostream &	os,
		const CLReactionGlyph &	g
	)		[friend]

insert operator

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The documentation for this class was generated from the following files:

• copasi/layout/CLReactionGlyph.h
• copasi/layout/CLReactionGlyph.cpp