CCSPMethod Member List

This is the complete list of members for CCSPMethod, including all inherited members.

adaptiveSA enum value	CCopasiMethod
add(CCopasiObject *pObject, const bool &adopt=true)	CCopasiContainer	[virtual]
addDirectDependency(const CCopasiObject *pObject)	CCopasiObject
addGroup(const std::string &name)	CCopasiParameterGroup
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)	CCopasiContainer	[inline, protected]
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)	CCopasiContainer	[inline, protected]
addParameter(const CCopasiParameter &parameter)	CCopasiParameterGroup
addParameter(const std::string &name, const CCopasiParameter::Type type)	CCopasiParameterGroup
addParameter(const std::string &name, const CCopasiParameter::Type type, const CType &value)	CCopasiParameterGroup	[inline]
addParameter(CCopasiParameter *pParameter)	CCopasiParameterGroup
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0)	CCopasiContainer	[inline, protected]
Array enum value	CCopasiObject	[protected]
assertGroup(const std::string &name)	CCopasiParameterGroup
assertParameter(const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue)	CCopasiParameterGroup	[inline]
basisRefinement(C_INT &N, C_INT &M, CMatrix< C_FLOAT64 > &ALA, CMatrix< C_FLOAT64 > &TAU, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &A0, CMatrix< C_FLOAT64 > &B0)	CCSPMethod
beginIndex() const	CCopasiParameterGroup
beginName() const	CCopasiParameterGroup
BOOL enum value	CCopasiParameter
buildUpdateSequence(const std::set< const CCopasiObject * > &objects, const std::set< const CCopasiObject * > &uptoDateObjects, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >())	CCopasiObject	[static]
calculateDerivativesX(C_FLOAT64 *X1, C_FLOAT64 *Y1)	CTSSAMethod	[protected]
calculateJacobianX(C_INT &n, CVector< C_FLOAT64 > &y, CMatrix< C_FLOAT64 > &J)	CCSPMethod
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container)	CCopasiContainer
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL)	CCopasiContainer
CCopasiMethod(const CCopasiTask::Type &taskType, const SubType &subType, const CCopasiContainer *pParent=NULL)	CCopasiMethod	[protected]
CCopasiMethod(const CCopasiMethod &src, const CCopasiContainer *pParent=NULL)	CCopasiMethod
CCopasiObject()	CCopasiObject	[protected]
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0)	CCopasiObject	[protected]
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL)	CCopasiObject
CCopasiParameter(const CCopasiParameter &src, const CCopasiContainer *pParent=NULL)	CCopasiParameter
CCopasiParameter(const std::string &name, const Type &type, const void *pValue=NULL, const CCopasiContainer *pParent=NULL, const std::string &objectType="Parameter")	CCopasiParameter
CCopasiParameterGroup()	CCopasiParameterGroup	[protected]
CCopasiParameterGroup(const CCopasiParameterGroup &src, const CCopasiContainer *pParent=NULL)	CCopasiParameterGroup
CCopasiParameterGroup(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &objectType="ParameterGroup")	CCopasiParameterGroup
CCSPMethod(const CCSPMethod &src, const CCopasiContainer *pParent=NULL)	CCSPMethod
clear()	CCopasiParameterGroup
clearDirectDependencies()	CCopasiObject
clearRefresh()	CCopasiObject
CN enum value	CCopasiParameter
Container enum value	CCopasiObject	[protected]
createAnnotationsM()	CCSPMethod
createTSSAMethod(CCopasiMethod::SubType subType=CCopasiMethod::unset, CTSSAProblem *pProblem=NULL)	CTSSAMethod	[static]
crossSectionMethod enum value	CCopasiMethod
CSPImportanceIndex(C_INT &N, C_FLOAT64 &tauM1, CMatrix< C_FLOAT64 > &Q)	CCSPMethod
CSPOutput(C_INT &N, C_INT &M, C_INT &R)	CCSPMethod
CSPParticipationIndex(C_INT &N, C_FLOAT64 &tauM1, CMatrix< C_FLOAT64 > &B0)	CCSPMethod
CSPradicalPointer(C_INT &N, C_INT &M, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B)	CCSPMethod
cspstep(const double &deltaT, C_INT &n, C_INT &m, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B)	CCSPMethod
CTSSAMethod(const CCopasiMethod::SubType &subType, const CCopasiContainer *pParent=NULL)	CTSSAMethod	[protected]
CTSSAMethod(const CTSSAMethod &src, const CCopasiContainer *pParent=NULL)	CTSSAMethod
CTSSAMethod::createTSSAMethod(CCopasiMethod::SubType subType, CTSSAProblem *pProblem)	CCSPMethod	[friend]
DataModel enum value	CCopasiObject	[protected]
dependsOn(std::set< const CCopasiObject * > candidates, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const	CCopasiObject
deterministic enum value	CCopasiMethod
directMethod enum value	CCopasiMethod
DOUBLE enum value	CCopasiParameter
DsaLsodar enum value	CCopasiMethod
EFMAlgorithm enum value	CCopasiMethod
EFMBitPatternAlgorithm enum value	CCopasiMethod
EFMBitPatternTreeAlgorithm enum value	CCopasiMethod
elevateChildren()	CTSSAMethod	[protected, virtual]
EmptyList	CCopasiContainer	[static]
emptyOutputData(C_INT &N, C_INT &M, C_INT &R)	CCSPMethod
emptyVectors()	CCSPMethod
endIndex() const	CCopasiParameterGroup
endName() const	CCopasiParameterGroup
evalF(const C_FLOAT64 *t, const C_FLOAT64 *y, C_FLOAT64 *ydot)	CTSSAMethod	[protected]
EvalF(const C_INT *n, const C_FLOAT64 *t, const C_FLOAT64 *y, C_FLOAT64 *ydot)	CTSSAMethod	[protected, static]
EvolutionaryProgram enum value	CCopasiMethod
EXPRESSION enum value	CCopasiParameter
FILE enum value	CCopasiParameter
findCandidatesNumber(C_INT &n, C_INT &k, CVector< C_FLOAT64 > &tsc, C_INT &info)	CCSPMethod
findTimeScaleSeparation(C_INT &n, C_INT &k, CVector< C_FLOAT64 > &tsc, C_INT &info)	CCSPMethod
Flag enum name	CCopasiObject	[protected]
GeneticAlgorithm enum value	CCopasiMethod
GeneticAlgorithmSR enum value	CCopasiMethod
getAllDependencies(std::set< const CCopasiObject * > &dependencies, const std::set< const CCopasiObject * > &context) const	CCopasiObject
getAmplitudeAnn() const	CCSPMethod	[inline]
getChildObjectUnits(const CCopasiObject *pObject) const	CCopasiContainer	[virtual]
getCN() const	CCopasiObject	[virtual]
getDirectDependencies(const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const	CCopasiObject	[virtual]
getFastReactionPointerAnn() const	CCSPMethod	[inline]
getFastReactionPointerNormedAnn() const	CCSPMethod	[inline]
getGroup(const std::string &name)	CCopasiParameterGroup
getGroup(const std::string &name) const	CCopasiParameterGroup
getGroup(const unsigned C_INT32 &index)	CCopasiParameterGroup
getGroup(const unsigned C_INT32 &index) const	CCopasiParameterGroup
getImportanceIndexAnn() const	CCSPMethod	[inline]
getImportanceIndexNormedRowAnn() const	CCSPMethod	[inline]
getIndex(const std::string &name) const	CCopasiParameterGroup
getKey(const std::string &name) const	CCopasiParameterGroup
getKey(const unsigned C_INT32 &index) const	CCopasiParameterGroup
CCopasiParameter::getKey() const	CCopasiParameter	[virtual]
getName(const unsigned C_INT32 &index) const	CCopasiParameterGroup	[virtual]
getObject(const CCopasiObjectName &cn) const	CCopasiContainer	[virtual]
getObjectAncestor(const std::string &type) const	CCopasiObject
getObjectDataModel()	CCopasiObject
getObjectDataModel() const	CCopasiObject
getObjectDisplayName(bool regular=true, bool richtext=false) const	CCopasiParameter	[virtual]
getObjectName() const	CCopasiObject
getObjectParent() const	CCopasiObject
getObjects() const	CCopasiContainer	[virtual]
getObjectType() const	CCopasiObject
getParameter(const std::string &name)	CCopasiParameterGroup
getParameter(const std::string &name) const	CCopasiParameterGroup
getParameter(const unsigned C_INT32 &index)	CCopasiParameterGroup
getParameter(const unsigned C_INT32 &index) const	CCopasiParameterGroup
getParticipationIndexAnn() const	CCSPMethod	[inline]
getParticipationIndexNormedColumnAnn() const	CCSPMethod	[inline]
getParticipationIndexNormedRowAnn() const	CCSPMethod	[inline]
getRadicalPointerAnn() const	CCSPMethod	[inline]
getRefresh() const	CCopasiObject
getSubType() const	CCopasiMethod
getTable(std::string name)	CTSSAMethod	[inline]
getTableName() const	CTSSAMethod	[inline]
getType() const	CCopasiMethod
CCopasiParameterGroup::getType(const std::string &name) const	CCopasiParameterGroup
CCopasiParameterGroup::getType(const unsigned C_INT32 &index) const	CCopasiParameterGroup
getUnits() const	CCopasiContainer	[virtual]
getUpdateMethod() const	CCopasiObject
getValue(const std::string &name) const	CCopasiParameterGroup
getValue(const unsigned C_INT32 &index) const	CCopasiParameterGroup
getValue(const std::string &name)	CCopasiParameterGroup
getValue(const unsigned C_INT32 &index)	CCopasiParameterGroup
CCopasiParameter::getValue() const	CCopasiParameter
CCopasiParameter::getValue()	CCopasiParameter
getValueObject() const	CCopasiContainer	[virtual]
getValuePointer() const	CCopasiParameter	[virtual]
getVec_TimeScale(int step)	CTSSAMethod
GROUP enum value	CCopasiParameter
Gui enum value	CCopasiObject	[protected]
hasCircularDependencies(std::set< const CCopasiObject * > &candidates, std::set< const CCopasiObject * > &verified, const std::set< const CCopasiObject * > &context) const	CCopasiObject
hasUpdateMethod() const	CCopasiObject
HookeJeeves enum value	CCopasiMethod
Householder enum value	CCopasiMethod
hybrid enum value	CCopasiMethod
HybridGASA enum value	CCopasiMethod
hybridLSODA enum value	CCopasiMethod
index_iterator typedef	CCopasiParameterGroup
initializeAtol()	CTSSAMethod	[protected]
initializeIntegrationsParameter()	CTSSAMethod	[protected]
initializeParameter()	CCSPMethod	[virtual]
initObjects()	CCopasiContainer	[protected]
INT enum value	CCopasiParameter
integrationMethodStart(const CState *initialState)	CTSSAMethod	[protected]
integrationStep(const double &deltaT)	CTSSAMethod	[protected]
INVALID enum value	CCopasiParameter
isArray() const	CCopasiObject
isBlockDiagonal(C_INT &N, C_INT &M, CMatrix< C_FLOAT64 > &ALA, C_FLOAT64 small)	CCSPMethod
isContainer() const	CCopasiObject
isDataModel() const	CCopasiObject
isMatrix() const	CCopasiObject
isNameVector() const	CCopasiObject
isNonUniqueName() const	CCopasiObject
isReference() const	CCopasiObject
isRoot() const	CCopasiObject
isSeparator() const	CCopasiObject
isStaticString() const	CCopasiObject
isValidProblem(const CCopasiProblem *pProblem)	CTSSAMethod	[virtual]
isValidValue(const C_FLOAT64 &value) const	CCopasiParameter
isValidValue(const C_INT32 &value) const	CCopasiParameter
isValidValue(const unsigned C_INT32 &value) const	CCopasiParameter
isValidValue(const bool &value) const	CCopasiParameter
isValidValue(const std::string &value) const	CCopasiParameter
isValidValue(const CCopasiObjectName &value) const	CCopasiParameter
isValidValue(const std::vector< CCopasiParameter * > &value) const	CCopasiParameter
isValueBool() const	CCopasiObject
isValueDbl() const	CCopasiObject
isValueInt() const	CCopasiObject
isValueString() const	CCopasiObject
isVector() const	CCopasiObject
KEY enum value	CCopasiParameter
LevenbergMarquardt enum value	CCopasiMethod
load(CReadConfig &configBuffer, CReadConfig::Mode mode=CReadConfig::SEARCH)	CCopasiMethod	[virtual]
LSODAR enum value	CCopasiMethod
lyapWolf enum value	CCopasiMethod
mAerror	CCSPMethod
mAmplitude	CCSPMethod
mAmplitudeTab	CCSPMethod
map_index(C_FLOAT64 *eval_r, C_INT *index, const C_INT &dim)	CTSSAMethod	[protected]
map_index_desc(C_FLOAT64 *eval_r, C_INT *index, const C_INT &dim)	CTSSAMethod	[protected]
mapTableToName	CTSSAMethod
mat_anal_fast_space(C_INT &slow)	CTSSAMethod	[protected]
mat_anal_fast_space_thomas(C_INT &slow)	CTSSAMethod	[protected]
mat_anal_metab(C_INT &slow)	CTSSAMethod	[protected]
mat_anal_mod(C_INT &slow)	CTSSAMethod	[protected]
mat_anal_mod_space(C_INT &slow)	CTSSAMethod	[protected]
mAtol	CTSSAMethod	[protected]
Matrix enum value	CCopasiObject	[protected]
mB	CCSPMethod
mcaMethodReder enum value	CCopasiMethod
mCfast	CTSSAMethod	[protected]
mCSPbasis	CCSPMethod
mCurrentStep	CTSSAMethod
mCurrentTime	CTSSAMethod
mData	CTSSAMethod	[protected]
mDtol	CTSSAMethod	[protected]
mDWork	CTSSAMethod	[protected]
mEps	CCSPMethod
mEPS	CTSSAMethod	[protected]
mErrorMsg	CTSSAMethod	[protected]
mFastReactionPointer	CCSPMethod
mFastReactionPointerNormed	CCSPMethod
mFastReactionPointerNormedTab	CCSPMethod
mFastReactionPointerTab	CCSPMethod
mG	CCSPMethod
mI	CCSPMethod
mImportanceIndex	CCSPMethod
mImportanceIndexNormedRow	CCSPMethod
mImportanceIndexNormedRowTab	CCSPMethod
mImportanceIndexTab	CCSPMethod
mIter	CCSPMethod
mIWork	CTSSAMethod	[protected]
mJacobian	CTSSAMethod	[protected]
mJacobian_initial	CTSSAMethod	[protected]
mJType	CTSSAMethod	[protected]
mKey	CCopasiParameter	[protected]
mLSODA	CTSSAMethod	[protected]
mLsodaStatus	CTSSAMethod	[protected]
mObjects	CCopasiContainer	[protected]
ModelEntity enum value	CCopasiObject	[protected]
modesAmplitude(C_INT &N, C_INT &M, CVector< C_FLOAT64 > &g, CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &F)	CCSPMethod
modesAreExhausted(C_INT &N, C_INT &M, C_FLOAT64 &tauM, C_FLOAT64 &tauM1, CVector< C_FLOAT64 > &g, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &F)	CCSPMethod
mParticipationIndex	CCSPMethod
mParticipationIndexNormedColumn	CCSPMethod
mParticipationIndexNormedColumnTab	CCSPMethod
mParticipationIndexNormedRow	CCSPMethod
mParticipationIndexNormedRowTab	CCSPMethod
mParticipationIndexTab	CCSPMethod
mpCallBack	CCopasiMethod	[protected]
mpCurrentState	CTSSAMethod	[protected]
mpModel	CTSSAMethod	[protected]
mpProblem	CTSSAMethod	[protected]
mpState	CTSSAMethod	[protected]
mQ	CTSSAMethod	[protected]
mQ_desc	CTSSAMethod	[protected]
mQz	CTSSAMethod	[protected]
mR	CTSSAMethod	[protected]
mR_desc	CTSSAMethod	[protected]
mRadicalPointer	CCSPMethod
mRadicalPointerTab	CCSPMethod
mReducedModel	CTSSAMethod	[protected]
mRerror	CCSPMethod
mRtol	CTSSAMethod	[protected]
mSetVectors	CCSPMethod
mSize	CCopasiParameter	[protected]
mSlow	CTSSAMethod	[protected]
mState	CTSSAMethod	[protected]
mTd	CTSSAMethod	[protected]
mTd_save	CTSSAMethod	[protected]
mTdInverse	CTSSAMethod	[protected]
mTdInverse_save	CTSSAMethod	[protected]
mTime	CTSSAMethod	[protected]
mTsc	CCSPMethod
mTStep	CCSPMethod
mValue	CCopasiParameter	[protected]
mVec_mAmplitude	CCSPMethod
mVec_mFastReactionPointer	CCSPMethod
mVec_mFastReactionPointerNormed	CCSPMethod
mVec_mImportanceIndex	CCSPMethod
mVec_mImportanceIndexNormedRow	CCSPMethod
mVec_mParticipationIndex	CCSPMethod
mVec_mParticipationIndexNormedColumn	CCSPMethod
mVec_mParticipationIndexNormedRow	CCSPMethod
mVec_mRadicalPointer	CCSPMethod
mVec_SlowModes	CTSSAMethod
mVec_TimeScale	CTSSAMethod
mVfast_space	CTSSAMethod	[protected]
mVslow	CTSSAMethod	[protected]
mVslow_metab	CTSSAMethod	[protected]
mVslow_space	CTSSAMethod	[protected]
mY	CTSSAMethod	[protected]
mY_cons	CTSSAMethod	[protected]
mY_initial	CTSSAMethod	[protected]
mYdot	CTSSAMethod	[protected]
mYerror	CCSPMethod
name_iterator typedef	CCopasiParameterGroup
NameVector enum value	CCopasiObject	[protected]
NelderMead enum value	CCopasiMethod
Newton enum value	CCopasiMethod
NonUniqueName enum value	CCopasiObject	[protected]
objectMap typedef	CCopasiContainer
operator<<(std::ostream &os, const CCopasiMethod &o)	CCopasiMethod	[friend]
CCopasiParameterGroup::operator<<(std::ostream &os, const CCopasiParameterGroup &o)	CCopasiParameterGroup	[friend]
CCopasiParameter::operator<<(std::ostream &os, const CCopasiParameter &o)	CCopasiParameter	[friend]
CCopasiContainer::operator<<(std::ostream &os, const CCopasiObject &o)	CCopasiObject	[friend]
operator=(const CCopasiParameterGroup &rhs)	CCopasiParameterGroup
CCopasiParameter::operator=(const CCopasiParameter &rhs)	CCopasiParameter
operator==(const CCopasiParameterGroup &lhs, const CCopasiParameterGroup &rhs)	CCopasiParameterGroup	[friend]
CCopasiParameter::operator==(const CCopasiParameter &lhs, const CCopasiParameter &rhs)	CCopasiParameter	[friend]
orthog(C_INT &number1, C_INT &number2)	CTSSAMethod	[protected]
pAmplitudeAnn	CCSPMethod
parameterGroup typedef	CCopasiParameterGroup
ParticleSwarm enum value	CCopasiMethod
perturbateA(C_INT &n, CMatrix< C_FLOAT64 > &A, C_FLOAT64 delta)	CCSPMethod
pFastReactionPointerAnn	CCSPMethod
pFastReactionPointerNormedAnn	CCSPMethod
pImportanceIndexAnn	CCSPMethod
pImportanceIndexNormedRowAnn	CCSPMethod
pParticipationIndexAnn	CCSPMethod
pParticipationIndexNormedColumnAnn	CCSPMethod
pParticipationIndexNormedRowAnn	CCSPMethod
pRadicalPointerAnn	CCSPMethod
Praxis enum value	CCopasiMethod
print(std::ostream *ostream) const	CCopasiMethod	[virtual]
printResult(std::ostream *ostream) const	CCSPMethod	[virtual]
pTmp1	CCSPMethod
pTmp2	CCSPMethod
pTmp3	CCSPMethod
pTmp3Normed	CCSPMethod
pTmp4	CCSPMethod
pTmp4NormedColumn	CCSPMethod
pTmp4NormedRow	CCSPMethod
pTmp5	CCSPMethod
pTmp5NormedRow	CCSPMethod
RandomSearch enum value	CCopasiMethod
RandomSearchMaster enum value	CCopasiMethod
Reference enum value	CCopasiObject	[protected]
remove(CCopasiObject *pObject)	CCopasiContainer	[virtual]
removeDirectDependency(const CCopasiObject *pObject)	CCopasiObject
removeParameter(const std::string &name)	CCopasiParameterGroup
removeParameter(const unsigned C_INT32 &index)	CCopasiParameterGroup
returnCurrentTime(int step)	CTSSAMethod	[inline]
Root enum value	CCopasiObject	[protected]
scanMethod enum value	CCopasiMethod
schur(C_INT &info)	CTSSAMethod	[protected]
schur_desc(C_INT &info)	CTSSAMethod	[protected]
sensMethod enum value	CCopasiMethod
Separator enum value	CCopasiObject	[protected]
setAnnotationM(int step)	CCSPMethod	[virtual]
setCallBack(CProcessReport *pCallBack)	CCopasiMethod	[virtual]
setCurrentState(CState *currentState)	CTSSAMethod
setDirectDependencies(const std::set< const CCopasiObject * > &directDependencies)	CCopasiObject
setObjectName(const std::string &name)	CCopasiObject
setObjectParent(const CCopasiContainer *pParent)	CCopasiObject	[virtual]
setObjectValue(const C_FLOAT64 &value)	CCopasiObject
setObjectValue(const C_INT32 &value)	CCopasiObject
setObjectValue(const bool &value)	CCopasiObject
setProblem(CTSSAProblem *problem)	CTSSAMethod
setRefresh(CType *pType, void(CType::*method)(void))	CCopasiObject	[inline]
setRenameHandler(CRenameHandler *rh)	CCopasiObject	[inline, static]
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &))	CCopasiObject	[inline]
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &))	CCopasiObject	[inline]
setUpdateMethod(CType *pType, void(CType::*method)(const bool &))	CCopasiObject	[inline]
setValue(const std::string &name, const CType &value)	CCopasiParameterGroup	[inline]
setValue(const unsigned C_INT32 &index, const CType &value)	CCopasiParameterGroup	[inline]
CCopasiParameter::setValue(const CType &value)	CCopasiParameter	[inline]
CCopasiParameter::setValue(const std::vector< CCopasiParameter * > &value)	CCopasiParameter
setVectors(int fast)	CCSPMethod
SimulatedAnnealing enum value	CCopasiMethod
size() const	CCopasiParameterGroup
smadd(CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &C, C_INT &n1, C_INT &n2)	CCSPMethod
sminverse(C_INT &n, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B)	CCSPMethod
smmult(CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &C, C_INT &n1, C_INT &n2, C_INT &n3)	CCSPMethod
smnorm(C_INT &n, CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, C_INT &n1)	CCSPMethod
smpRenameHandler	CCopasiObject	[protected, static]
smsubst(CMatrix< C_FLOAT64 > &A, CMatrix< C_FLOAT64 > &B, CMatrix< C_FLOAT64 > &C, C_INT &n1, C_INT &n2)	CCSPMethod
SRES enum value	CCopasiMethod
start(const CState *initialState)	CCSPMethod	[virtual]
StaticString enum value	CCopasiObject	[protected]
Statistics enum value	CCopasiMethod
SteepestDescent enum value	CCopasiMethod
step(const double &deltaT)	CCSPMethod	[virtual]
stochastic enum value	CCopasiMethod
STRING enum value	CCopasiParameter
SubType enum name	CCopasiMethod
SubTypeName	CCopasiMethod	[static]
swap(const unsigned C_INT32 &iFrom, const unsigned C_INT32 &iTo)	CCopasiParameterGroup
swap(index_iterator &from, index_iterator &to)	CCopasiParameterGroup
sylvester(C_INT slow, C_INT &info)	CTSSAMethod	[protected]
tableNames	CTSSAMethod
tauLeap enum value	CCopasiMethod
TruncatedNewton enum value	CCopasiMethod
tssCSP enum value	CCopasiMethod
tssILDM enum value	CCopasiMethod
tssILDMModified enum value	CCopasiMethod
Type enum name	CCopasiParameter
TypeName	CCopasiParameter	[static]
UDOUBLE enum value	CCopasiParameter
UINT enum value	CCopasiParameter
unset enum value	CCopasiMethod
update_nid(C_INT *index, C_INT *nid, const C_INT &dim)	CTSSAMethod	[protected]
update_pid(C_INT *index, C_INT *pid, const C_INT &dim)	CTSSAMethod	[protected]
ValueBool enum value	CCopasiObject	[protected]
ValueDbl enum value	CCopasiObject	[protected]
ValueInt enum value	CCopasiObject	[protected]
ValueString enum value	CCopasiObject	[protected]
Vector enum value	CCopasiObject	[protected]
XMLSubType	CCopasiMethod	[static]
XMLType	CCopasiParameter	[static]
yCorrection(C_INT &N, C_INT &M, CVector< C_FLOAT64 > &y, CMatrix< C_FLOAT64 > &TAUM, CMatrix< C_FLOAT64 > &F, CMatrix< C_FLOAT64 > &A)	CCSPMethod
~CCopasiContainer()	CCopasiContainer	[virtual]
~CCopasiMethod()	CCopasiMethod	[virtual]
~CCopasiObject()	CCopasiObject	[virtual]
~CCopasiParameter()	CCopasiParameter	[virtual]
~CCopasiParameterGroup()	CCopasiParameterGroup	[virtual]
~CCSPMethod()	CCSPMethod
~CTSSAMethod()	CTSSAMethod