, including all inherited members.
add(CCopasiObject *pObject, const bool &adopt=true) | CCopasiContainer | [virtual] |
addDirectDependency(const CCopasiObject *pObject) | CCopasiObject | |
addExperiment(const std::string &key) | CFitItem | |
addGroup(const std::string &name) | CCopasiParameterGroup | |
addMatrixReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
addObjectReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
addParameter(const CCopasiParameter ¶meter) | CCopasiParameterGroup | |
addParameter(const std::string &name, const CCopasiParameter::Type type) | CCopasiParameterGroup | |
addParameter(const std::string &name, const CCopasiParameter::Type type, const CType &value) | CCopasiParameterGroup | [inline] |
addParameter(CCopasiParameter *pParameter) | CCopasiParameterGroup | |
addVectorReference(const std::string &name, CType &reference, const unsigned C_INT32 &flag=0) | CCopasiContainer | [inline, protected] |
Array enum value | CCopasiObject | [protected] |
assertGroup(const std::string &name) | CCopasiParameterGroup | |
assertParameter(const std::string &name, const CCopasiParameter::Type type, const CType &defaultValue) | CCopasiParameterGroup | [inline] |
beginIndex() const | CCopasiParameterGroup | |
beginName() const | CCopasiParameterGroup | |
BOOL enum value | CCopasiParameter | |
buildUpdateSequence(const std::set< const CCopasiObject * > &objects, const std::set< const CCopasiObject * > &uptoDateObjects, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) | CCopasiObject | [static] |
calculateConstraintViolation() | CFitConstraint | |
CCopasiContainer(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=CCopasiObject::Container) | CCopasiContainer | |
CCopasiContainer(const CCopasiContainer &src, const CCopasiContainer *pParent=NULL) | CCopasiContainer | |
CCopasiObject() | CCopasiObject | [protected] |
CCopasiObject(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &type="CN", const unsigned C_INT32 &flag=0) | CCopasiObject | [protected] |
CCopasiObject(const CCopasiObject &src, const CCopasiContainer *pParent=NULL) | CCopasiObject | |
CCopasiParameter(const CCopasiParameter &src, const CCopasiContainer *pParent=NULL) | CCopasiParameter | |
CCopasiParameter(const std::string &name, const Type &type, const void *pValue=NULL, const CCopasiContainer *pParent=NULL, const std::string &objectType="Parameter") | CCopasiParameter | |
CCopasiParameterGroup() | CCopasiParameterGroup | [protected] |
CCopasiParameterGroup(const CCopasiParameterGroup &src, const CCopasiContainer *pParent=NULL) | CCopasiParameterGroup | |
CCopasiParameterGroup(const std::string &name, const CCopasiContainer *pParent=NULL, const std::string &objectType="ParameterGroup") | CCopasiParameterGroup | |
CFitConstraint() | CFitConstraint | [protected] |
CFitConstraint(const CCopasiContainer *pParent, const std::string &name="FitItem") | CFitConstraint | |
CFitConstraint(const CFitConstraint &src, const CCopasiContainer *pParent=NULL) | CFitConstraint | |
CFitConstraint(const CCopasiParameterGroup &group, const CCopasiContainer *pParent=NULL) | CFitConstraint | |
CFitItem() | CFitItem | [protected] |
CFitItem(const CCopasiContainer *pParent, const std::string &name="FitItem") | CFitItem | |
CFitItem(const CFitItem &src, const CCopasiContainer *pParent=NULL) | CFitItem | |
CFitItem(const CCopasiParameterGroup &group, const CCopasiContainer *pParent=NULL) | CFitItem | |
checkConstraint() const | CFitConstraint | [virtual] |
COptItem::checkConstraint(const C_FLOAT64 &value) const | COptItem | |
checkLowerBound(const C_FLOAT64 &value) const | COptItem | |
checkUpperBound(const C_FLOAT64 &value) const | COptItem | |
clear() | CCopasiParameterGroup | |
clearDirectDependencies() | CCopasiObject | |
clearRefresh() | CCopasiObject | |
CN enum value | CCopasiParameter | |
compile(const std::vector< CCopasiContainer * > listOfContainer=CCopasiContainer::EmptyList) | CFitItem | [virtual] |
Container enum value | CCopasiObject | [protected] |
COptItem() | COptItem | [protected] |
COptItem(const CCopasiContainer *pParent, const std::string &name="OptimizationItem") | COptItem | |
COptItem(const COptItem &src, const CCopasiContainer *pParent=NULL) | COptItem | |
COptItem(const CCopasiParameterGroup &group, const CCopasiContainer *pParent=NULL) | COptItem | |
DataModel enum value | CCopasiObject | [protected] |
dependsOn(std::set< const CCopasiObject * > candidates, const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const | CCopasiObject | |
DOUBLE enum value | CCopasiParameter | |
elevateChildren() | CFitItem | [virtual] |
EmptyList | CCopasiContainer | [static] |
endIndex() const | CCopasiParameterGroup | |
endName() const | CCopasiParameterGroup | |
EXPRESSION enum value | CCopasiParameter | |
FILE enum value | CCopasiParameter | |
Flag enum name | CCopasiObject | [protected] |
getAllDependencies(std::set< const CCopasiObject * > &dependencies, const std::set< const CCopasiObject * > &context) const | CCopasiObject | |
getChildObjectUnits(const CCopasiObject *pObject) const | CCopasiContainer | [virtual] |
getCN() const | CCopasiObject | [virtual] |
getConstraintViolation() const | CFitConstraint | [virtual] |
getDirectDependencies(const std::set< const CCopasiObject * > &context=std::set< const CCopasiObject * >()) const | CCopasiObject | [virtual] |
getExperiment(const unsigned C_INT32 &index) const | CFitItem | |
getExperimentCount() const | CFitItem | |
getExperiments() const | CFitItem | |
getGroup(const std::string &name) | CCopasiParameterGroup | |
getGroup(const std::string &name) const | CCopasiParameterGroup | |
getGroup(const unsigned C_INT32 &index) | CCopasiParameterGroup | |
getGroup(const unsigned C_INT32 &index) const | CCopasiParameterGroup | |
getIndex(const std::string &name) const | CCopasiParameterGroup | |
getKey(const std::string &name) const | CCopasiParameterGroup | |
getKey(const unsigned C_INT32 &index) const | CCopasiParameterGroup | |
CCopasiParameter::getKey() const | CCopasiParameter | [virtual] |
getLocalValue() const | CFitItem | |
getLowerBound() const | COptItem | |
getLowerBoundValue() const | COptItem | [inline] |
getName(const unsigned C_INT32 &index) const | CCopasiParameterGroup | [virtual] |
getObject() const | COptItem | |
CCopasiParameterGroup::getObject(const CCopasiObjectName &cn) const | CCopasiContainer | [virtual] |
getObjectAncestor(const std::string &type) const | CCopasiObject | |
getObjectCN() const | COptItem | |
getObjectDataModel() | CCopasiObject | |
getObjectDataModel() const | CCopasiObject | |
getObjectDisplayName() const | COptItem | |
CCopasiParameterGroup::getObjectDisplayName(bool regular=true, bool richtext=false) const | CCopasiParameter | [virtual] |
getObjectName() const | CCopasiObject | |
getObjectParent() const | CCopasiObject | |
getObjects() const | CCopasiContainer | [virtual] |
getObjectType() const | CCopasiObject | |
getObjectValue() const | CFitItem | [virtual] |
getParameter(const std::string &name) | CCopasiParameterGroup | |
getParameter(const std::string &name) const | CCopasiParameterGroup | |
getParameter(const unsigned C_INT32 &index) | CCopasiParameterGroup | |
getParameter(const unsigned C_INT32 &index) const | CCopasiParameterGroup | |
getRandomValue(CRandom *pRandom=NULL) | COptItem | |
getRefresh() const | CCopasiObject | |
getStartValue() const | COptItem | |
getType(const std::string &name) const | CCopasiParameterGroup | |
getType(const unsigned C_INT32 &index) const | CCopasiParameterGroup | |
CCopasiParameter::getType() const | CCopasiParameter | |
getUnits() const | CCopasiContainer | [virtual] |
getUpdateMethod() const | CFitItem | [virtual] |
getUpperBound() const | COptItem | |
getUpperBoundValue() const | COptItem | [inline] |
getValue(const std::string &name) const | CCopasiParameterGroup | |
getValue(const unsigned C_INT32 &index) const | CCopasiParameterGroup | |
getValue(const std::string &name) | CCopasiParameterGroup | |
getValue(const unsigned C_INT32 &index) | CCopasiParameterGroup | |
CCopasiParameter::getValue() const | CCopasiParameter | |
CCopasiParameter::getValue() | CCopasiParameter | |
getValueObject() const | CCopasiContainer | [virtual] |
getValuePointer() const | CCopasiParameter | [virtual] |
GROUP enum value | CCopasiParameter | |
Gui enum value | CCopasiObject | [protected] |
hasCircularDependencies(std::set< const CCopasiObject * > &candidates, std::set< const CCopasiObject * > &verified, const std::set< const CCopasiObject * > &context) const | CCopasiObject | |
hasUpdateMethod() const | CCopasiObject | |
index_iterator typedef | CCopasiParameterGroup | |
initObjects() | CCopasiContainer | [protected] |
INT enum value | CCopasiParameter | |
INVALID enum value | CCopasiParameter | |
isArray() const | CCopasiObject | |
isContainer() const | CCopasiObject | |
isDataModel() const | CCopasiObject | |
isMatrix() const | CCopasiObject | |
isNameVector() const | CCopasiObject | |
isNonUniqueName() const | CCopasiObject | |
isReference() const | CCopasiObject | |
isRoot() const | CCopasiObject | |
isSeparator() const | CCopasiObject | |
isStaticString() const | CCopasiObject | |
isValid() const | CFitItem | [virtual] |
isValid(CCopasiParameterGroup &group) | CFitItem | [static] |
isValidValue(const C_FLOAT64 &value) const | CCopasiParameter | |
isValidValue(const C_INT32 &value) const | CCopasiParameter | |
isValidValue(const unsigned C_INT32 &value) const | CCopasiParameter | |
isValidValue(const bool &value) const | CCopasiParameter | |
isValidValue(const std::string &value) const | CCopasiParameter | |
isValidValue(const CCopasiObjectName &value) const | CCopasiParameter | |
isValidValue(const std::vector< CCopasiParameter * > &value) const | CCopasiParameter | |
isValueBool() const | CCopasiObject | |
isValueDbl() const | CCopasiObject | |
isValueInt() const | CCopasiObject | |
isValueString() const | CCopasiObject | |
isVector() const | CCopasiObject | |
KEY enum value | CCopasiParameter | |
Matrix enum value | CCopasiObject | [protected] |
mKey | CCopasiParameter | [protected] |
mLocalValue | CFitItem | [protected] |
mLowerBound | COptItem | [protected] |
mObjects | CCopasiContainer | [protected] |
ModelEntity enum value | CCopasiObject | [protected] |
mpGrpAffectedExperiments | CFitItem | [protected] |
mpLocalMethod | CFitItem | [protected] |
mpLowerBound | COptItem | [protected] |
mpLowerObject | COptItem | [protected] |
mpMethod | COptItem | [protected] |
mpObject | COptItem | [protected] |
mpObjectValue | COptItem | [protected] |
mpParmLowerBound | COptItem | [protected] |
mpParmObjectCN | COptItem | [protected] |
mpParmStartValue | COptItem | [protected] |
mpParmUpperBound | COptItem | [protected] |
mpRandom | COptItem | [protected, static] |
mpUpperBound | COptItem | [protected] |
mpUpperObject | COptItem | [protected] |
mSize | CCopasiParameter | [protected] |
mUpperBound | COptItem | [protected] |
mValue | CCopasiParameter | [protected] |
name_iterator typedef | CCopasiParameterGroup | |
NameVector enum value | CCopasiObject | [protected] |
NonUniqueName enum value | CCopasiObject | [protected] |
objectMap typedef | CCopasiContainer | |
operator<<(std::ostream &os, const CFitItem &o) | CFitItem | [friend] |
COptItem::operator<<(std::ostream &os, const COptItem &o) | COptItem | [friend] |
CCopasiParameterGroup::operator<<(std::ostream &os, const CCopasiParameterGroup &o) | CCopasiParameterGroup | [friend] |
CCopasiParameter::operator<<(std::ostream &os, const CCopasiParameter &o) | CCopasiParameter | [friend] |
CCopasiContainer::operator<<(std::ostream &os, const CCopasiObject &o) | CCopasiObject | [friend] |
operator=(const CCopasiParameterGroup &rhs) | CCopasiParameterGroup | |
CCopasiParameter::operator=(const CCopasiParameter &rhs) | CCopasiParameter | |
operator==(const CCopasiParameterGroup &lhs, const CCopasiParameterGroup &rhs) | CCopasiParameterGroup | [friend] |
CCopasiParameter::operator==(const CCopasiParameter &lhs, const CCopasiParameter &rhs) | CCopasiParameter | [friend] |
parameterGroup typedef | CCopasiParameterGroup | |
print(std::ostream *ostream) const | CCopasiParameterGroup | [virtual] |
Reference enum value | CCopasiObject | [protected] |
remove(CCopasiObject *pObject) | CCopasiContainer | [virtual] |
removeDirectDependency(const CCopasiObject *pObject) | CCopasiObject | |
removeExperiment(const unsigned C_INT32 &index) | CFitItem | |
removeParameter(const std::string &name) | CCopasiParameterGroup | |
removeParameter(const unsigned C_INT32 &index) | CCopasiParameterGroup | |
resetConstraintViolation() | CFitConstraint | |
Root enum value | CCopasiObject | [protected] |
Separator enum value | CCopasiObject | [protected] |
setDirectDependencies(const std::set< const CCopasiObject * > &directDependencies) | CCopasiObject | |
setLocalValue(const C_FLOAT64 &value) | CFitItem | |
setLowerBound(const CCopasiObjectName &lowerBound) | COptItem | |
setObjectCN(const CCopasiObjectName &objectCN) | COptItem | |
setObjectName(const std::string &name) | CCopasiObject | |
setObjectParent(const CCopasiContainer *pParent) | CCopasiObject | [virtual] |
setObjectValue(const C_FLOAT64 &value) | CCopasiObject | |
setObjectValue(const C_INT32 &value) | CCopasiObject | |
setObjectValue(const bool &value) | CCopasiObject | |
setRefresh(CType *pType, void(CType::*method)(void)) | CCopasiObject | [inline] |
setRenameHandler(CRenameHandler *rh) | CCopasiObject | [inline, static] |
setStartValue(const C_FLOAT64 &value) | COptItem | |
setUpdateMethod(CType *pType, void(CType::*method)(const C_FLOAT64 &)) | CCopasiObject | [inline] |
setUpdateMethod(CType *pType, void(CType::*method)(const C_INT32 &)) | CCopasiObject | [inline] |
setUpdateMethod(CType *pType, void(CType::*method)(const bool &)) | CCopasiObject | [inline] |
setUpperBound(const CCopasiObjectName &upperBound) | COptItem | |
setValue(const std::string &name, const CType &value) | CCopasiParameterGroup | [inline] |
setValue(const unsigned C_INT32 &index, const CType &value) | CCopasiParameterGroup | [inline] |
CCopasiParameter::setValue(const CType &value) | CCopasiParameter | [inline] |
CCopasiParameter::setValue(const std::vector< CCopasiParameter * > &value) | CCopasiParameter | |
size() const | CCopasiParameterGroup | |
smpRenameHandler | CCopasiObject | [protected, static] |
StaticString enum value | CCopasiObject | [protected] |
STRING enum value | CCopasiParameter | |
swap(const unsigned C_INT32 &iFrom, const unsigned C_INT32 &iTo) | CCopasiParameterGroup | |
swap(index_iterator &from, index_iterator &to) | CCopasiParameterGroup | |
Type enum name | CCopasiParameter | |
TypeName | CCopasiParameter | [static] |
UDOUBLE enum value | CCopasiParameter | |
UINT enum value | CCopasiParameter | |
updateBounds(std::vector< COptItem * >::iterator it) | CFitItem | |
ValueBool enum value | CCopasiObject | [protected] |
ValueDbl enum value | CCopasiObject | [protected] |
ValueInt enum value | CCopasiObject | [protected] |
ValueString enum value | CCopasiObject | [protected] |
Vector enum value | CCopasiObject | [protected] |
XMLType | CCopasiParameter | [static] |
~CCopasiContainer() | CCopasiContainer | [virtual] |
~CCopasiObject() | CCopasiObject | [virtual] |
~CCopasiParameter() | CCopasiParameter | [virtual] |
~CCopasiParameterGroup() | CCopasiParameterGroup | [virtual] |
~CFitConstraint() | CFitConstraint | [virtual] |
~CFitItem() | CFitItem | [virtual] |
~COptItem() | COptItem | [virtual] |