SCopasiXMLParserCommon Struct Reference

#include <CCopasiXMLParser.h>

List of all members.

Public Member Functions
	SCopasiXMLParserCommon ()
Public Attributes
CVersion *	pVersion
CModel *	pModel
std::string	CharacterData
std::vector< std::pair < std::string, std::string > >	mAssignments
CCopasiVectorN< CEvaluationTree > *	pFunctionList
CEvaluationTree *	pFunction
CFunctionParameter *	pFunctionVariable
std::string	FunctionDescription
bool	mExistingFunction
CReaction *	pReaction
CEvent *	pEvent
CEventAssignment *	pEventAssignment
std::map< std::string, std::vector< std::string > >	SourceParameterKeys
CKeyFactory	KeyMap
std::vector< CModelEntity * >	StateVariableList
CCopasiVectorN< CCopasiTask > *	pTaskList
CReportDefinitionVector *	pReportList
COutputDefinitionVector *	pPlotList
CReportDefinition *	pReport
CCopasiTask *	pCurrentTask
CCopasiParameter *	pCurrentParameter
std::stack < CCopasiParameterGroup * >	ParameterGroupStack
CPlotSpecification *	pCurrentPlot
CPlotItem *	pCurrentPlotItem
CPlotDataChannelSpec *	pCurrentChannelSpec
std::vector< std::string >	UnmappedKeyParameters
CListOfLayouts *	pLayoutList
CLayout *	pCurrentLayout
CLCompartmentGlyph *	pCompartmentGlyph
CLMetabGlyph *	pMetaboliteGlyph
CLReactionGlyph *	pReactionGlyph
CLTextGlyph *	pTextGlyph
CLGraphicalObject *	pAdditionalGO
CLCurve *	pCurve
CLLineSegment *	pLineSegment
CLMetabReferenceGlyph *	pMetaboliteReferenceGlyph
int	mParameterGroupLevel
std::map< std::string, std::vector< CCopasiTask * > >	taskReferenceMap
std::map< std::string, std::vector< std::pair < std::vector < CRegisteredObjectName > *, unsigned C_INT32 > > >	reportReferenceMap
SCopasiXMLGUI *	pGUI
CCopasiDataModel *	pDataModel

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Constructor & Destructor Documentation

SCopasiXMLParserCommon::SCopasiXMLParserCommon

(

)

Default Constructor

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Member Data Documentation

std::string SCopasiXMLParserCommon::CharacterData

Storage for a comment.

std::string SCopasiXMLParserCommon::FunctionDescription

The description of the function.

CKeyFactory SCopasiXMLParserCommon::KeyMap

A map relating CopasiXML function keys with internal keys

std::vector<std::pair<std::string, std::string> > SCopasiXMLParserCommon::mAssignments

Storage for assignments.

bool SCopasiXMLParserCommon::mExistingFunction

Indicates whether the current function was already in the list;

int SCopasiXMLParserCommon::mParameterGroupLevel

Nesting level of the currently processed parameter group

CLGraphicalObject* SCopasiXMLParserCommon::pAdditionalGO

std::stack< CCopasiParameterGroup * > SCopasiXMLParserCommon::ParameterGroupStack

Stack of parameter groups which is needed since nesting of groups is possible.

CLCompartmentGlyph* SCopasiXMLParserCommon::pCompartmentGlyph

CPlotDataChannelSpec* SCopasiXMLParserCommon::pCurrentChannelSpec

Pointer to the currently processed channel.

CLayout* SCopasiXMLParserCommon::pCurrentLayout

Pointer to the currently processed layout

CCopasiParameter* SCopasiXMLParserCommon::pCurrentParameter

Pointer to the currently processed parameter

CPlotSpecification* SCopasiXMLParserCommon::pCurrentPlot

Pointer to the currently processed plot

CPlotItem* SCopasiXMLParserCommon::pCurrentPlotItem

Pointer to the currently processed plot item.

CCopasiTask* SCopasiXMLParserCommon::pCurrentTask

Pointer to the currently processed task

CLCurve* SCopasiXMLParserCommon::pCurve

CCopasiDataModel* SCopasiXMLParserCommon::pDataModel

A pointer to the datamodel.

CEvent* SCopasiXMLParserCommon::pEvent

Pointer to the currently processed event

CEventAssignment* SCopasiXMLParserCommon::pEventAssignment

Pointer to the currently processed event assignment

CEvaluationTree* SCopasiXMLParserCommon::pFunction

Pointer to the currently processed function.

CCopasiVectorN< CEvaluationTree >* SCopasiXMLParserCommon::pFunctionList

Pointer to a vector of functions which has been loaded or is to be saved. The ownership is handed to the user.

CFunctionParameter* SCopasiXMLParserCommon::pFunctionVariable

Pointer to the currently processed function.

SCopasiXMLGUI* SCopasiXMLParserCommon::pGUI

CListOfLayouts* SCopasiXMLParserCommon::pLayoutList

Pointer to a list of Layouts which has been loaded or is to be saved. The ownership is handed to the user.

CLLineSegment* SCopasiXMLParserCommon::pLineSegment

CLMetabGlyph* SCopasiXMLParserCommon::pMetaboliteGlyph

CLMetabReferenceGlyph* SCopasiXMLParserCommon::pMetaboliteReferenceGlyph

CModel* SCopasiXMLParserCommon::pModel

The model which is build during parsing.

COutputDefinitionVector* SCopasiXMLParserCommon::pPlotList

Pointer to a vector of plots which has been loaded or is to be saved. The ownership is handed to the user.

CReaction* SCopasiXMLParserCommon::pReaction

Pointer to the currently processed reaction.

CLReactionGlyph* SCopasiXMLParserCommon::pReactionGlyph

CReportDefinition* SCopasiXMLParserCommon::pReport

Pointer to the currently processed report

CReportDefinitionVector* SCopasiXMLParserCommon::pReportList

Pointer to a vector of reports which has been loaded or is to be saved. The ownership is handed to the user.

CCopasiVectorN< CCopasiTask >* SCopasiXMLParserCommon::pTaskList

Pointer to a vector of tasks which has been loaded or is to be saved. The ownership is handed to the user.

CLTextGlyph* SCopasiXMLParserCommon::pTextGlyph

CVersion* SCopasiXMLParserCommon::pVersion

The version of the parsed file

std::map<std::string , std::vector < std::pair < std::vector <CRegisteredObjectName >*, unsigned C_INT32 > > > SCopasiXMLParserCommon::reportReferenceMap

A map that stores a vector of pairs of header,body or footer addresses with the index together with the key to the reference.

std::map< std::string, std::vector< std::string > > SCopasiXMLParserCommon::SourceParameterKeys

The keys of the source parameters for a call parameter.

std::vector< CModelEntity * > SCopasiXMLParserCommon::StateVariableList

A map relating StateVariables to model entities.

std::map<std::string , std::vector < CCopasiTask* > > SCopasiXMLParserCommon::taskReferenceMap

A map that stores a vector of tasks that reference a certain key together with the key to the reference.

std::vector< std::string > SCopasiXMLParserCommon::UnmappedKeyParameters

Vector of parameters of type key which could not be updated due to missing target objects at time of read.

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The documentation for this struct was generated from the following files:

• copasi/xml/CCopasiXMLParser.h
• copasi/xml/CCopasiXMLParser.cpp