- s -

• save() : CConfigurationFile , CMIRIAMInfo , CQFittingItemWidget , CCopasiXML , CTimeSeries , CCopasiXMLInterface
• saveCommon() : TaskWidget
• saved() : CQValidator< Type >
• saveData() : CopasiPlot , CCopasiXMLInterface
• saveDataToFile() : Plot3d , CQTSSAResultSubWidget , TimeSeriesSubWidget
• saveElement() : CCopasiXMLInterface
• saveMethod() : TaskWidget
• saveModel() : CCopasiDataModel , DataModelGUI
• saveParameter() : CCopasiXMLInterface
• saveParameterGroup() : CCopasiXMLInterface
• savePressed() : ParametersWidget
• saveTable() : CopasiTableWidget
• saveTask() : SensitivitiesWidget , SteadyStateWidget , TaskWidget , CQEFMWidget , CQFittingWidget , CQLyapWidget , CQMCAWidget , CQMoietiesTaskWidget , CQOptimizationWidget , CQTrajectoryWidget , CQTSSAWidget , ScanWidget
• saveToBackend() : CMCAResultWidget , CQTSSAResultWidget , TimeSeriesWidget
• SaveToCurveSpec() : Curve2DWidget , HistoWidget
• saveToFile() : CQLyapResultWidget , CQSensResultWidget
• saveToFunction() : FunctionWidget1
• saveToModel() : ParametersWidget
• saveToPlotSpec() : PlotSubwidget
• saveToReaction() : ReactionsWidget1
• saveToScanItem() : CScanWidgetRandom , CScanWidgetRepeat , CScanWidgetScan
• saveToScanProblem() : CScanWidgetTask
• saveXhtml() : CCopasiXMLInterface
• SBML2Copasi() : CRDFGraphConverter
• sbmlId2CopasiCN() : SBMLImporter
• SBMLImporter() : SBMLImporter
• SBMLIncompatibility() : SBMLIncompatibility
• SBMLReference() : SBMLReference
• scale() : CGraphCurve , CGraphNode , CLabel , CLayout , CLPoint , CLDimensions , CLBoundingBox , CLLineSegment , CLCurve , CArrow
• scaleFactor() : BaseWidget
• scaleMCA() : CMCAMethod
• scalePosition() : CLabel
• scaling_targetfunction() : CSensMethod
• scaling_variables() : CSensMethod
• scan() : CScanMethod
• ScanWidget() : ScanWidget
• schur() : CTSSAMethod
• schur_desc() : CTSSAMethod
• SCopasiXMLGUI() : SCopasiXMLGUI
• SCopasiXMLParserCommon() : SCopasiXMLParserCommon
• scrollBar() : ScrollZoomer
• ScrollBar() : ScrollBar
• ScrollData() : ScrollData
• ScrollZoomer() : ScrollZoomer
• selectionTableChanged() : CQArrayAnnotationsWidget
• selectObjects() : CCopasiSimpleSelectionTree , ObjectBrowserDialog , ObjectBrowserWidget
• SensitivitiesWidget() : SensitivitiesWidget
• SensWidgetComboBox() : SensWidgetComboBox
• separate() : CopasiPlot , PlotWindow , CReport , CTimeSeries , CCopasiTask , COutputInterface , COutputHandler
• separateProductArguments() : SBMLImporter
• set() : CXMLAttributeList
• set_debug() : FlexLexer
• setActive() : CPlotSpecification
• setActivity() : CPlotItem
• setAdjustInitialConditions() : CScanProblem
• setAllBoxesChecked() : CQCurrentValueTable
• setAllBoxesUnchecked() : CQCurrentValueTable
• setAlpha() : BarColor
• setAndSets() : CNormalLogical
• setAnimationRunning() : CQLayoutMainWindow
• setAnnotationCN() : CArrayAnnotation
• setAnnotationM() : CCSPMethod , CILDMMethod , CILDMModifiedMethod , CTSSAMethod
• setAnnotationString() : CArrayAnnotation
• setAppend() : CReport
• setApplicationFont() : CConfigurationFile
• setAreaUnit() : CModel
• setArray() : CArrayAnnotation
• setArrayAnnotation() : CQArrayAnnotationsWidget
• setArrow() : CGraphCurve
• setArrowP() : CGraphCurve
• setAssociatedEntityKey() : CSlider
• setAssumeDimensionlessOne() : CUnitInterfaceSBML
• setAvogadro() : CModel
• setAxes() : Plot3d
• setBase() : ScrollBar
• setBase1() : CLLineSegment
• setBase2() : CLLineSegment
• setBit() : CZeroSet
• setBlankNodeId() : CRDFObject , CRDFSubject
• setBoolean() : CQExpressionWidget
• setBooleanRequired() : CEvaluationNodeCall , CExpression , CQValidatorExpression
• setBoundingBox() : CLGraphicalObject
• setBrowserObject() : ObjectBrowserItem
• setCallBack() : CEFMProblem , CEFMTask , CMoietiesTask , COptProblem , COptTask , CFitProblem , CFitTask , CCopasiMethod , CCopasiProblem , CCopasiTask
• setCallParameter() : CFunctionParameterMap
• setCheck() : ObjectBrowserWidget
• setCheckMark() : ObjectBrowserWidget
• setChemEqFromString() : CChemEqInterface
• setChemEqString() : CChemEqInterface , CReactionInterface
• setChemicalEquation() : CFindDimensions
• setChild() : CCopasiNode< _Data >
• setChildren() : ConverterASTNode
• setChoices() : CNormalLogical
• setColor() : CQValidator< Type > , ColorTableItem , ColorCheckTableItem
• setColorCoding() : CQArrayAnnotationsWidget
• setColorMax() : CColorScaleAdvanced
• setColorMin() : CColorScaleAdvanced
• setColorMode() : CQLayoutMainWindow
• setColors() : Plot3d , CQBarChart
• setColorScalingAutomatic() : CQArrayAnnotationsWidget
• setColorVector() : BarColor
• setColumnSize() : CQArrayAnnotationsWidget
• setComment() : CReportDefinition
• setCompileFlag() : CModel
• setConcentration() : CMetab
• setConcentrationName() : CODEExporter , CODEExporterBM , CODEExporterC , CODEExporterXPPAUT
• setCondition() : CNormalChoice , CNormalChoiceLogical
• setConflict() : CUnitInformation
• setConstant() : CNodeK
• setConstantNodeSize() : CQGLNetworkPainter
• setConstantNodeSizeForAllSteps() : CQGLNetworkPainter
• setContentFromEditor() : ComboItem
• setContradiction() : CDimension
• setCopasiMainWindow() : WizardDialog
• setCopasiVector() : CArrayAnnotation
• setCornerWidget() : ScrollZoomer
• setCorrectUsage() : SBMLImporter
• setCreatedDT() : CMIRIAMInfo
• setCrossingsLimit() : CCrossSectionProblem
• setCrossValidationSet() : CQFittingItemWidget
• setCurrentFolderId() : SliderDialog
• setCurrentItem() : CQArrayAnnotationsWidget
• setCurrentObjectList() : SensWidgetComboBox
• setCurrentPosition() : CQGLNetworkPainter
• setCurrentPositionX() : CQGLNetworkPainter
• setCurrentPositionY() : CQGLNetworkPainter
• setCurrentSlider() : SliderDialog
• setCurrentState() : CTrajectoryMethod , CTSSAMethod
• setCurrentStep() : CQPlayerControlWidget
• setCurve() : CLMetabReferenceGlyph , CLReactionGlyph
• setCurvesVisibility() : CopasiPlot
• setData() : Plot3d , CEvaluationNodeObject , CQBiologicalDescriptionDM , CQCreatorDM , CQModifiedDM , CQReferenceDM , CQBarChart , CQBaseDataModel , CQCompartmentDM , CQEFMNetReactionDM , CQEFMReactionDM , CQEFMSpeciesDM , CQEventDM , CQFluxModeDM , CQFunctionDM , CQGlobalQuantityDM , CQPlotDM , CQReactionDM , CQReportDM , CQSpecieDM , CCopasiNode< _Data >
• setDataModel() : ListViews
• setDatamodel() : CCopasiXML , CCopasiXMLParser
• setDataSize() : C2DPlotCurve
• setDataType() : CRDFLiteral
• setDate() : CModification
• setDefault() : SliderDialog
• setDefinedSliders() : SliderSettingsDialog
• setDelayAssignment() : CEvent
• setDelayExpression() : CEvent
• setDelayExpressionPtr() : CEvent
• setDenominator() : CNormalFraction
• setDenominatorOne() : CNormalFraction
• setDenominatorsOne() : CNormalProduct
• setDependentOn() : CMetab
• setDescription() : CReference , CArrayAnnotation
• setDescriptions() : CQBarChart
• setDimension() : CDimension
• setDimensionality() : CCompartment
• setDimensionDescription() : CArrayAnnotation
• setDimensions() : CLayout , CLBoundingBox , CLGraphicalObject
• setDirectDependencies() : CCopasiObject
• setDisplayName() : CMIRIAMResourceObject
• setDivergenceRequested() : CLyapProblem
• setDuration() : CTrajectoryProblem , CTSSAProblem
• setEditorData() : CQComboDelegate , CQDateTimeEditDelegate , CQSpinBoxDelegate
• setEmail() : CCreator
• setEnableOKAndCancel() : CopasiTableWidget
• setEnd() : CLLineSegment
• setExp() : CNormalItemPower
• setExperimentSet() : CQFittingItemWidget
• setExperimentType() : CExperiment
• setExpertMode() : CCopasiSelectionWidget
• setExponentNumber() : CLyapProblem
• setExportCOPASIMIRIAM() : CSBMLExporter
• setExportName() : CODEExporterC
• setExportNameOfFunction() : CODEExporterC
• setExpression() : CEventAssignment , CModelEntity , CQExpressionWidget
• setExpressionPtr() : CEventAssignment , CModelEntity
• setExpressionType() : CQExpressionWidget
• setFactor() : CNormalProduct , CMCAMethod , CColorScaleAverage
• setFalseExpression() : CNormalChoice , CNormalChoiceLogical
• setFamilyName() : CCreator
• setFieldValue() : CRDFNode
• setFilename() : CFunctionDB
• setFileName() : CExperiment , CExperimentFileInfo
• setFilteredText() : CQMessageBox
• setFirstRow() : CExperiment
• setFlagConc() : CQSpecieDM
• setFlagLimitCrossings() : CCrossSectionProblem
• setFlagLimitTime() : CCrossSectionProblem
• setFocusOnBars() : CQArrayAnnotationsWidget
• setFocusOnTable() : CQArrayAnnotationsWidget
• setFontSizeForLabels() : CQGLNetworkPainter , CQLayoutMainWindow
• setFraction() : CNormalFunction
• setFractions() : CNormalCall , CNormalSum
• setFramework() : CopasiWidget , CQPlotsWidget , CQReactionsWidget , CQReportsWidget , CQSpeciesDetail , CQSpeciesWidget , DataModelGUI , ListViews , ParametersWidget , ReactionsWidget1 , SliderDialog , StateSubwidget , TimeSeriesSubWidget , TimeSeriesWidget
• setFunction() : CReaction , CQExpressionWidget
• setFunctionAndDoMapping() : CReactionInterface
• setFunctionFromExpressionTree() : CReaction
• setFunctionList() : CCopasiXML , CCopasiXMLParser
• setFunctionSBMLIds() : CSBMLExporter
• setFunctionWithEmptyMapping() : CReactionInterface
• setGivenName() : CCreator
• setGlobalScaling() : CQLayoutMainWindow
• setGraphicalObjectKey() : CLTextGlyph
• setGraphSize() : CQGLNetworkPainter
• setGUI() : CCopasiXML , CCopasiXMLParser
• setHeaderRow() : CExperiment
• setHeight() : CLDimensions , CLGraphicalObject
• setHScrollBarMode() : ScrollZoomer
• setHScrollBarPosition() : ScrollZoomer
• setId() : CBiologicalDescription , CMIRIAMResourceObject , CRDFNode , CReference
• setIgnoreUpdates() : CopasiWidget
• setImportCOPASIMIRIAM() : SBMLImporter
• setImportHandler() : SBMLImporter
• setIncrement() : C2DPlotCurve
• setIndex() : CNodeK
• setIndividualScaling() : CQLayoutMainWindow
• setInfix() : CEvaluationTree , CExpression , CFunction , CMassAction
• setInfo() : CUnitInformation
• setInitialConcentration() : CMetab
• setInitialExpression() : CModelEntity
• setInitialExpressionPtr() : CModelEntity
• setInitialState() : CModel , CMCAProblem , CSteadyStateTask
• setInitialTime() : CModel
• setInitialValue() : CModelEntity
• setInitialValuePtr() : CModelEntity
• setInitialValues() : SBMLImporter
• setInverted() : ScrollBar
• setIsBezier() : CLLineSegment
• setIsNegated() : CNormalLogical
• setIsRowOriented() : CExperiment
• setIsTable() : CReportDefinition
• setIsUsed() : CFunctionParameter , CColorScale
• setItem() : CNormalItemPower , CTimeSeriesTable
• setItemAnimated() : CQGLNetworkPainter
• setItemPowers() : CNormalProduct
• setItemType() : CQFittingItemWidget
• setIterator() : CStepMatrixColumn
• setJacobianRequested() : CSteadyStateProblem
• setKeyIndex() : CQCurrentValueTable
• setLabelText() : CGraphNode
• setLanguage() : CRDFLiteral
• setLastRow() : CExperiment
• setLayoutList() : CCopasiXML , CCopasiXMLParser
• setLeft() : CNormalGeneralPower , CNormalLogicalItem , CNodeK
• setLegend() : Plot3d
• setLegendEnabled() : CQArrayAnnotationsWidget
• setLengthUnit() : CModel
• setLexicalData() : CRDFLiteral
• setLine() : CArrow
• setListType() : CSensItem
• setLiteral() : CRDFObject
• setLocal() : CReactionInterface
• setLocalValue() : CReactionInterface , CFitItem
• setLog() : CColorScaleSimple
• setLogScale() : ScrollBar
• setLogX() : CPlotSpecification
• setLogY() : CPlotSpecification
• setLowerBound() : COptItem
• setMapping() : CReactionInterface
• setMaster() : COutputHandler
• setMaximize() : COptProblem
• setMaxIntensityPoint() : CColorScaleBiLog
• setMaxNodeSize() : CQLayoutMainWindow
• setMaxOverallConcentration() : CSimSummaryInfo
• setMaxValue() : CQLayoutMainWindow , CopasiSlider , CSlider
• setMetabGlyphKey() : CLMetabReferenceGlyph
• setMetabolite() : CChemEqElement
• setMethodType() : CEFMTask , CLyapTask , CMoietiesTask , COptTask , CFitTask , CTrajectoryTask , CTSSATask , CCopasiTask
• setMinAndMaxValue() : CQLayoutMainWindow
• setMinMax() : CColorScaleSimple
• setMinNodeSize() : CQLayoutMainWindow
• setMinorMajorFactor() : CopasiSlider
• setMinValue() : CQLayoutMainWindow , CopasiSlider , CSlider
• setMiriamAnnotation() : CAnnotation
• setMIRIAMCitation() : CMIRIAMResource
• setMIRIAMDisplayName() : CMIRIAMResource
• setMIRIAMPattern() : CMIRIAMResource
• setMIRIAMResources() : CMIRIAMResourceObject
• setMIRIAMUpdateFrequency() : CMIRIAMResources
• setMIRIAMURI() : CMIRIAMResource
• setMode() : CArrayAnnotation
• setModel() : CModelExpansion , CModelAdd , CModelMerging , COptProblem , CFitProblem , Curve2DWidget , HistoWidget , Expression2PresentationMML , CMCAMethod , CMCAProblem , CCopasiPlotSelectionDialog , CCopasiSelectionDialog , SliderSettingsDialog , CCopasiProblem , CCopasiXML
• setModelData() : CQComboDelegate , CQIndexComboDelegate , CQDateTimeEditDelegate , CQSpinBoxDelegate
• setModelObjectKey() : CLGraphicalObject
• setModelType() : CModel
• setModulus() : CRandom
• setMolecularitiesForMassAction() : CFindDimensions
• setMultiplicity() : CChemEqElement
• setName() : CNormalCall , CNormalItem , CNodeK , CProgressBar , IndexedNode , CProcessReport , CXMLAttributeList
• setNode() : CMIRIAMResourceObject
• setNodeSize() : CQGLNetworkPainter
• setNodeSizeWithoutChangingCurves() : CQGLNetworkPainter
• setNotes() : CAnnotation
• setNumCols() : CQCurrentValueTable , CExperimentObjectMap
• setNumColumns() : CExperiment
• setNumerator() : CNormalFraction
• setNumMinorTicks() : CopasiSlider
• setNumRows() : CQCurrentValueTable
• setNumSteps() : CQPlayerControlWidget
• setObject() : CRDFNode , CopasiSlider
• setObjectCN() : COptItem , CExperimentObjectMap::CDataColumn , CExperimentObjectMap
• setObjectiveFunction() : COptProblem
• setObjectKey() : CCompartmentGraphNode , CGraphNode , IndexedNode
• setObjectName() : CCopasiObject
• setObjectParent() : CEventAssignment , CEvent , CMetab , CModelEntity , CReaction , CCopasiObject
• setObjectType() : ObjectBrowserItem
• setObjectValue() : CCopasiObject
• setODEName() : CODEExporter , CODEExporterBM , CODEExporterC , CODEExporterXPPAUT
• setOldIndex() : CNodeK
• setOnlyAlgebraicDependencies() : CDotOutput
• setOrder() : CEvent
• setORG() : CCreator
• setOriginalValue() : CopasiSlider , CSlider
• setOstream() : CInternalSolver , Cxerrwd
• setOutputDefinitionVector() : COutputHandlerPlot
• setOutputInSubtask() : CScanProblem
• setOutputStartTime() : CTrajectoryProblem , CTSSAProblem , CCrossSectionProblem
• setOutputVector() : CCopasiSelectionDialog , CCopasiSelectionWidget , CCopasiSimpleSelectionTree , ObjectBrowserDialog , ObjectBrowserWidget
• setOutputVectors() : CCopasiPlotSelectionDialog
• setpar_() : CTruncatedNewton
• setParameterMapping() : CReaction
• setParameterMappingVector() : CReaction
• setParameterValue() : CReaction
• setParent() : CCopasiNode< _Data >
• setParentWindow() : SliderDialog
• setPlotList() : CCopasiXML
• setPlotTitle() : Plot3d , CQBarChart
• setPoint() : CArrow
• setPosition() : CLBoundingBox , CLGraphicalObject
• setPrecision() : CReportDefinition
• setPredicate() : CBiologicalDescription
• setProblem() : CLyapMethod , CMoietiesMethod , COptMethod , CScanMethod , CTrajectoryMethod , CTSSAMethod
• setProducts() : CNormalSum
• setQApp() : DataModelGUI
• setQuantityUnit() : CModel
• setRange() : CQValidatorDouble , CQValidatorInt
• setRate() : CModelEntity
• setReaction() : Expression2PresentationMML
• setReactionName() : CReactionInterface
• setReadOnly() : CQExpressionMmlStackedWidget
• setRecentMIRIAMResources() : CConfigurationFile
• setReference() : CCopasiObjectReference< CType >
• setRefresh() : CCopasiObject
• setRenameHandler() : CCopasiObject
• setReport() : CReportDefinitionSelect
• setReportDefinition() : CReport
• setReportList() : CCopasiXML
• setReservedNames() : CODEExporter , CODEExporterBM , CODEExporterC , CODEExporterXPPAUT
• setResidualsRequired() : CFitProblem
• setResource() : CBiologicalDescription , CRDFObject , CRDFSubject , CReference
• setReversibility() : CChemEq , CChemEqInterface , CReactionInterface
• setReversible() : CFunction , CReaction
• setRight() : CNormalGeneralPower , CNormalLogicalItem , CNodeK
• setRole() : CLMetabReferenceGlyph , CGraphCurve , CExperimentObjectMap::CDataColumn , CExperimentObjectMap
• setRoot() : CEvaluationTree
• setRowInTable() : CQCurrentValueTable
• setSBMLFileName() : CCopasiDataModel
• setSBMLId() : CEvaluationTree , CEvent , CModelEntity , CReaction
• setSBMLLevel() : UnitConversionFactory
• setSBMLVersion() : UnitConversionFactory
• setScale() : Plot3d
• setScaleMode() : CQGLNetworkPainter
• setScaling() : CSlider
• setScheduled() : CCopasiTask
• setSeparator() : CExperiment , CReportDefinition , CTableCell
• setSibling() : CCopasiNode< _Data >
• setSingleObjectCN() : CSensItem
• setSingleSelection() : CCopasiSelectionWidget , CCopasiSelectionDialog
• setSize() : CGraphNode , C2DCurveData , CHistoCurveData
• setSizeMode() : CQLayoutMainWindow
• setSkipDependenciesOnCompartments() : CDotOutput
• setSlider() : SliderSettingsDialog , BaseWidget , Plot3d
• setSliderObject() : CSlider
• setSliderType() : CSlider
• setSliderValue() : CSlider
• setSolution() : COptProblem
• setStabilityAnalysisRequested() : CSteadyStateProblem
• setStart() : CLLineSegment
• setStartValue() : COptItem
• setState() : CModel , CHybridMethod , CHybridMethodLSODA
• setStatus() : CFunctionAnalyzer::CValue , CMetab , CModelEntity
• setSteadyStateRequested() : CMCAProblem
• setSteadyStateResolution() : CMCAMethod
• setSteadyStateStatus() : CMCAMethod
• setStepNumber() : CQParaPanel , CTrajectoryProblem , CTSSAProblem
• setStepSize() : CTrajectoryProblem , CTSSAProblem
• setStepsPerSecond() : CQLayoutMainWindow
• setSubject() : CRDFNode
• setSubtask() : CScanProblem
• setSubtaskType() : COptProblem
• setSubTaskType() : CSensProblem
• setSubtype() : CNodeK
• setSymmetric() : CColorScaleSimple
• setSynced() : CSlider
• setTabOrder() : CCopasiPlotSelectionDialog
• setTarget() : CReport
• setTargetKey() : CEventAssignment
• setTask() : CQEFMNetReactionDM , CQEFMReactionDM , CQEFMSpeciesDM , CQFluxModeDM
• setTaskList() : CCopasiXML
• setTaskType() : CReportDefinition
• setText() : ComboItem , CLTextGlyph , CQMessageBox , CQReportListItem , MyLineEdit
• setThreshold() : CColorScale1
• setTickFactor() : CSlider
• setTickNumber() : CSlider
• setTime() : CModel , CState
• setTimeLimit() : CCrossSectionProblem
• setTimeSeries() : CTimeSeriesTable
• setTimeSeriesRequested() : CTrajectoryProblem , CTSSAProblem
• setTimeUnit() : CModel
• setTitle() : CModel , CPlotItem , CReportDefinition
• setTransientTime() : CLyapProblem
• setTransitionTime() : CMetab
• setTree() : CEvaluationTree
• setTreshold() : CSparseMatrix
• setTriggerExpression() : CEvent
• setTriggerExpressionPtr() : CEvent
• setTriplet() : CQRDFTreeViewItem
• setTrueExpression() : CNormalChoice , CNormalChoiceLogical
• setType() : CNormalCall , CNormalFunction , CNormalGeneralPower , CNormalItem , CEvaluationTree , CFunctionParameter , CNodeK , CRDFObject , CRDFSubject , CPlotItem , CCopasiTask , CopasiSlider , CRDFLiteral , CNormalLogicalItem
• setucr_() : CTruncatedNewton
• setUncheck() : ObjectBrowserWidget
• setUnitInterface() : Expression2PresentationMMLUnits
• setUnknown() : CDimension
• setupBalances() : CHybridMethod , CHybridMethodLSODA
• setUpdateMethod() : CCopasiObject
• setUpdateModel() : CCopasiTask
• setupDependencyGraph() : CHybridMethodLSODA , CHybridMethod
• setupDependencyGraphAndBalances() : CStochMethod
• setupDimensions() : CFindDimensions
• setupMetab2React() : CHybridMethodLSODA , CHybridMethod
• setupMetab2ReactComplete() : CHybridMethod , CHybridMethodLSODA
• setupMetab2ReactPlusModifier() : CHybridMethod , CHybridMethodLSODA
• setupPartition() : CHybridMethod , CHybridMethodLSODA
• setUpperBound() : COptItem
• setupPriorityQueue() : CHybridMethod , CHybridMethodLSODA
• setupUi() : Ui_CQProgressItemBar , Ui_CQTextDialog , Ui_FunctionItemWidget , Ui_CQProgressItemText
• setupWidget() : MyLineEdit
• setURI() : CRDFPredicate , CMIRIAMResourceObject
• setURL() : SBMLReference
• setUsage() : CFunctionParameter
• setUsed() : CModelEntity
• setUseHeuristics() : CFindDimensions
• setUseReactionNameInLocalParameters() : Expression2PresentationMML
• setUserOrder() : CStateTemplate
• setValue() : CQCurrentValueTable , CModelEntity , CSensMethod , CCopasiParameter , CCopasiParameterGroup , CXMLAttributeList , CCopasiParameterGroup , CopasiSlider , CFunctionAnalyzer::CValue
• setValueOnSlider() : CQLayoutMainWindow
• setValuePtr() : CModelEntity
• setValues() : CFittingPoint
• setVectors() : CCSPMethod , CILDMMethod , CTSSAMethod , CILDMModifiedMethod
• setVersion() : CVersion
• setVolumeUnit() : CModel
• setVScrollBarMode() : ScrollZoomer
• setVScrollBarPosition() : ScrollZoomer
• setWebBrowser() : CConfigurationFile
• setWeight() : CExperimentObjectMap , CExperimentObjectMap::CDataColumn
• setWeightMethod() : CExperiment
• setWhitepoint() : CColorScaleBiLog
• setWidth() : CLDimensions , CLGraphicalObject
• setX() : CLPoint , CLGraphicalObject
• setY() : CLGraphicalObject , CLPoint
• setZoom() : Plot3d
• setZoomFactor() : CQGLNetworkPainter , CQLayoutMainWindow , CQGLViewport
• shallowCopy() : ConverterASTNode
• showColorLegend() : CQBarChart
• showConcentrations() : CTimeSeriesTable
• showLegend() : Plot3d
• showOptionsControls() : SliderSettingsDialog
• showStep() : CQGLNetworkPainter
• showUnits() : StateSubwidget
• signal_close() : CQLayoutMainWindow
• signal_show() : CQShowLayoutButton
• signalAddItem() : CProgressBar
• signalChanged() : ParameterTable
• signalCheckValidity() : CQExpressionMmlStackedWidget , CQExpressionMmlWidget
• signalFinishItem() : CProgressBar
• signalProgressAll() : CProgressBar
• signalSetName() : CProgressBar
• signalZoomIn() : CQGLNetworkPainter
• signalZoomOut() : CQGLNetworkPainter
• simpleCall() : CModelExpansion , CModelAdd , CModelMerging , CDotOutput
• simplify() : CNormalLogical , CNormalFraction , CNormalLogicalItem , CNormalGeneralPower , CNormalBase , CNormalCall , CNormalChoice , CNormalItemPower , CNormalFunction , CNormalItem , CNormalChoiceLogical , CNormalTranslation , CNormalProduct , CNormalSum
• simplifyNode() : CEvaluationNodeOperator , CEvaluationNode , CEvaluationNodeFunction
• simplifyTree() : CNormalTranslation
• simplifyTreeReptdly() : CNormalTranslation
• size() : CArrayAnnotation , CTableRow , CCopasiParameterGroup , C2DCurveData , CCallParameters< Type > , CFunctionParameters , CStateTemplate , CBitPatternTree , CTableauMatrix , CCopasiArray , CCopasiMatrixInterface< MatrixType > , CCopasiVectorInterface< VectorType > , CCopasiMessage , CMatrix< CType > , CVectorCore< CType > , CFluxMode , CReactionInterface , CHistoCurveData , CCopasiAbstractArray , CCopasiVector< CType > , CIndexedPriorityQueue , CXMLAttributeList
• sizeHint() : CopasiTableWidget
• skip() : CXMLAttributeList
• skippedEntity() : CStructureParser
• sliderActive() : CQBarChart
• sliderChanged() : SliderSettingsDialog
• SliderDialog() : SliderDialog
• sliderMoved() : Plot3d , BaseWidget , ScrollBar
• sliderObjectChanged() : SliderDialog
• sliderPressed() : CopasiSlider , SliderDialog
• sliderRange() : ScrollBar
• sliderReleased() : CopasiSlider , SliderDialog
• SliderSettingsDialog() : SliderSettingsDialog
• sliderValueChanged() : SliderDialog , CopasiSlider
• slot_clicked() : CQShowLayoutButton
• slot_show() : CQLayoutsWidget
• slotAddItem() : CProgressBar , ScanWidget
• slotApplyDiffusion() : CQExpandModelData
• slotApplyInitialState() : CopasiUI3Window
• slotBtnAll() : CQExperimentSelection
• slotBtnCancel() : CQExperimentSelection
• slotBtnCancelClicked() : CopasiTableWidget , ReactionsWidget1
• slotBtnClearClicked() : CQEventsWidget , CQPlotsWidget , CQReactionsWidget , CQGlobalQuantitiesWidget , CopasiTableWidget , CQMiriamWidget , CQCompartmentsWidget , CQFunctionsWidget , CQReportsWidget , CQSpeciesWidget
• slotBtnDeleteClicked() : CQGlobalQuantitiesWidget , CQSpeciesWidget , CopasiTableWidget , CQReactionsWidget , CQEventsWidget , CQFunctionsWidget , CQMiriamWidget , CQCompartmentsWidget , CQPlotsWidget , CQReportsWidget , ReactionsWidget1
• slotBtnNewClicked() : CQCompartmentsWidget , CQEventsWidget , CQReactionsWidget , ReactionsWidget1 , CQSpeciesWidget , CopasiTableWidget , CQFunctionsWidget , CQGlobalQuantitiesWidget , CQPlotsWidget , CQReportsWidget
• slotBtnNone() : CQExperimentSelection
• slotBtnOK() : CQExperimentSelection
• slotBtnOKClicked() : ReactionsWidget1 , CopasiTableWidget , CQModelWidget
• slotBtnRevertClicked() : CQModelWidget
• slotButton0() : FunctionItemWidget
• slotButton1() : FunctionItemWidget
• slotButton2() : FunctionItemWidget
• slotButton3() : FunctionItemWidget
• slotButton4() : FunctionItemWidget
• slotButton5() : FunctionItemWidget
• slotButton6() : FunctionItemWidget
• slotButton7() : FunctionItemWidget
• slotButton8() : FunctionItemWidget
• slotButton9() : FunctionItemWidget
• slotButtonAdd() : FunctionItemWidget
• slotButtonCancel() : FunctionItemWidget
• slotButtonClear() : FunctionItemWidget
• slotButtonConfirm() : FunctionItemWidget
• slotButtonCos() : FunctionItemWidget
• slotButtonDiv() : FunctionItemWidget
• slotButtonExp() : FunctionItemWidget
• slotButtonItems() : FunctionItemWidget
• slotButtonLeftB() : FunctionItemWidget
• slotButtonLn() : FunctionItemWidget
• slotButtonLog() : FunctionItemWidget
• slotButtonMin() : FunctionItemWidget
• slotButtonMul() : FunctionItemWidget
• slotButtonPower() : FunctionItemWidget
• slotButtonRightB() : FunctionItemWidget
• slotButtonSign() : FunctionItemWidget
• slotButtonSin() : FunctionItemWidget
• slotCancelButtonClicked() : FunctionWidget1 , CCopasiPlotSelectionDialog
• slotCapture() : CopasiUI3Window
• slotCheckBoxClicked() : ReactionsWidget1
• slotCheckModel() : CopasiUI3Window
• slotChooseObject() : CScanWidgetRandom , CScanWidgetScan
• slotComboBoxSelectionChanged() : ReactionsWidget1
• slotCommitButtonClicked() : FunctionWidget1
• slotCompartmentChanged() : CQExpandModelData
• slotConstraintNumberChanged() : CQFittingWidget , CQOptimizationWidget
• slotConvertToIrreversible() : CopasiUI3Window
• slotCopy() : CScanContainerWidget
• slotCopyEvent() : CQMiriamWidget
• slotCreatedDTChanged() : CQMiriamWidget
• slotCrossValidationData() : CQFittingWidget
• slotCurrentChanged() : CopasiTableWidget
• slotCursorPositionChanged() : CQExpressionWidget
• slotDel() : CScanContainerWidget
• slotDelayChecked() : CQLyapWidget
• slotDeleteButtonClicked() : FunctionWidget1
• slotDoubleClicked() : CQGlobalQuantitiesWidget , CQEventsWidget , CQFunctionsWidget , CQSpeciesWidget , CQPlotsWidget , CQReactionsWidget , CQReportsWidget , CQCompartmentsWidget , CopasiTableWidget , CQLayoutsWidget
• slotDown() : CScanContainerWidget
• slotDuration() : CQTSSAWidget , CQTrajectoryWidget
• slotEditExpression() : CQOptimizationWidget
• slotExceptionOccured() : TaskWidget
• slotExpandModel() : CopasiUI3Window
• slotExperimentData() : CQFittingWidget
• slotExpertCheckBoxToggled() : CCopasiPlotSelectionDialog
• slotExportMathModel() : CopasiUI3Window
• slotExportSBML() : CopasiUI3Window
• slotExpressionValid() : CQOptimizationWidget
• slotFcnDescriptionChanged() : FunctionWidget1
• slotFileExamplesCopasiFiles() : CopasiUI3Window
• slotFileExamplesSBMLFiles() : CopasiUI3Window
• slotFileOpen() : CopasiUI3Window
• slotFilePrint() : CopasiUI3Window
• slotFileSave() : CopasiUI3Window
• slotFileSaveAs() : CopasiUI3Window
• slotFilterChanged() : CQGlobalQuantitiesWidget , CQFunctionsWidget , CQEFMListWidget , CQReactionsWidget , CQReportsWidget , CQSpeciesWidget , CQCompartmentsWidget , CQEventsWidget , CQPlotsWidget
• slotFinishItem() : CProgressBar
• slotFinishThread() : TaskWidget
• slotFontSelection() : CopasiUI3Window
• slotForceUpdate() : MyLineEdit
• slotFrameworkChanged() : CopasiUI3Window
• slotGoExpressionWidget() : CQExpressionMmlWidget , CQExpressionMmlStackedWidget
• slotGoMmlWidget() : CQExpressionMmlStackedWidget , CQExpressionMmlWidget
• slotHValueChanged() : CQGLViewport
• slotImportSBML() : CopasiUI3Window
• slotIntervals() : CQTSSAWidget , CQTrajectoryWidget
• slotIntervalSize() : CQTSSAWidget , CQTrajectoryWidget
• slotLineEditChanged() : ReactionsWidget1
• slotLostFocus() : MyLineEdit
• slotModelObject() : CQMergingData
• slotNameChanged() : ReactionsWidget1
• slotNewButtonClicked() : FunctionWidget1
• slotNewFunction() : ReactionsWidget1
• slotObjectBrowserDialogWasClosed() : CopasiUI3Window
• slotOKButtonClicked() : CCopasiPlotSelectionDialog
• slotOpenRecentFile() : CopasiUI3Window
• slotOpenRecentSBMLFile() : CopasiUI3Window
• slotOpenUrl() : CQNotes
• slotOutputDelay() : CQTrajectoryWidget
• slotPageChange() : CQOptimizationWidget , CQFittingWidget
• slotParameterNumberChanged() : CQOptimizationWidget , CQFittingWidget
• slotParameterStatusChanged() : ReactionsWidget1
• slotPreferences() : CopasiUI3Window
• slotProgressAll() : CProgressBar
• slotQuit() : CopasiUI3Window
• slotRadioDec() : FunctionItemWidget
• slotRegistration() : CopasiUI3Window
• slotReturnPressed() : MyLineEdit
• slotReversibilityChanged() : FunctionWidget1
• slotSave() : CQDifferentialEquations , CMCAResultSubwidget
• slotScaled() : CMCAResultSubwidget
• slotSelectionChanged() : CQGlobalQuantitiesWidget , CQFunctionsWidget , CQCompartmentsWidget , CQPlotsWidget , CQExpressionWidget , CQReportsWidget , CQSpeciesWidget , CQReactionsWidget , CQEventsWidget
• slotSelectObject() : CQExpressionWidget
• slotSetName() : CProgressBar
• slotShowObjectBrowserDialog() : CopasiUI3Window
• slotShowSliders() : CopasiUI3Window
• slotSteadyStateChecked() : CQMCAWidget
• slotSubtaskChanged() : CQOptimizationWidget
• slotTableChanged() : ReactionsWidget1 , CQTSSAResultSubWidget
• slotTableDelKey() : CopasiTableWidget
• slotTableSelectionChanged() : CopasiTableWidget
• slotTableValueChanged() : FunctionWidget1
• slotTextChanged() : CQExpressionWidget , MyLineEdit
• slotTimeOrStepChanged() : CQTSSAResultSubWidget
• slotToggleMode() : CQNotes
• slotTutorialWizard() : CopasiUI3Window
• slotTypeChanged() : CQMergingData
• slotUp() : CScanContainerWidget
• slotUpdateInitialState() : CopasiUI3Window
• slotUpdateMIRIAM() : CopasiUI3Window
• slotUpdateWidget() : CQDifferentialEquations
• slotValidateXML() : CQNotes
• slotValueChanged() : CQDateTimeEditTableItem , CopasiTableWidget
• slotVValueChanged() : CQGLViewport
• SLVS() : SLVS
• SLVSFunctor() : SLVSFunctor< CType >
• smadd() : CCSPMethod
• sminverse() : CCSPMethod
• smmult() : CCSPMethod
• smnorm() : CCSPMethod
• smsubst() : CCSPMethod
• soap_close_socket() : MiriamWebServicesSoapBindingProxy
• soap_default() : ArrayOf_USCORExsd_USCOREstring
• soap_fault() : MiriamWebServicesSoapBindingProxy
• soap_fault_detail() : MiriamWebServicesSoapBindingProxy
• soap_fault_string() : MiriamWebServicesSoapBindingProxy
• soap_get() : ArrayOf_USCORExsd_USCOREstring
• soap_in() : ArrayOf_USCORExsd_USCOREstring
• soap_noheader() : MiriamWebServicesSoapBindingProxy
• soap_out() : ArrayOf_USCORExsd_USCOREstring
• soap_print_fault() : MiriamWebServicesSoapBindingProxy
• soap_put() : ArrayOf_USCORExsd_USCOREstring
• soap_serialize() : ArrayOf_USCORExsd_USCOREstring
• soap_sprint_fault() : MiriamWebServicesSoapBindingProxy
• soap_stream_fault() : MiriamWebServicesSoapBindingProxy
• soap_type() : ArrayOf_USCORExsd_USCOREstring
• sort() : CExperimentSet
• sortList() : ObjectList
• sortListInsert() : ObjectList
• SpecificUpdateMethod() : SpecificUpdateMethod< CType, VType >
• splitBranch() : CEvaluationNode
• splitColumns() : CStepMatrix
• splitDisplayName() : CMetabNameInterface
• splitFunction() : CFunction
• splitProduct() : CNormalTranslation
• splitSum() : CNormalTranslation
• stabilityAnalysis() : CEigen
• start() : CTrajectoryMethodDsaLsodar , CILDMMethod , CCSPMethod , CTSSAMethod , CLsodaMethod , CILDMModifiedMethod , CXMLElementHandler< CType, CCommon > , CHybridMethod , CLyapMethod , CCopasiTimer , CStochDirectMethod , CTauLeapMethod , CLyapWolfMethod , CStochMethod , CTrajectoryMethod , CTrajAdaptiveSA , CHybridMethodLSODA
• startAutomaticParameterCalculation() : CColorScaleBiLog , CColorScaleSimple , CColorScaleAverage , CColorScale
• startCdataSectionHandler() : CExpatTemplate< CType >
• startDoctypeDeclHandler() : CExpatTemplate< CType >
• startDocument() : CStructureParser
• startElement() : CStructureParser
• startElementHandler() : CExpatTemplate< CType >
• startNamespaceDeclHandler() : CExpatTemplate< CType >
• startSaveElement() : CCopasiXMLInterface
• stateChanged() : CTrajectoryMethodDsaLsodar , CLsodaMethod , CQValidatorFunction , CTrajectoryMethod
• StateSubwidget() : StateSubwidget
• StdException() : StdException
• SteadyStateWidget() : SteadyStateWidget
• step() : CILDMModifiedMethod , CStochDirectMethod , CLyapMethod , CILDMMethod , CTrajectoryMethodDsaLsodar , CLsodaMethod , CTauLeapMethod , CScanItemLinear , CScanItemRepeat , CScanItemRandom , CHybridMethod , CLyapWolfMethod , CTSSAMethod , CHybridMethodLSODA , CStochMethod , CScanItem , CTrajectoryMethod , CCSPMethod , CTrajAdaptiveSA
• step_backward() : CQPlayerControlWidget
• step_forward() : CQPlayerControlWidget
• stepChanged() : CQGLNetworkPainter
• stop() : CQPlayerControlWidget
• storeCurrentCombos() : CQArrayAnnotationsWidget
• storeCurrentItem() : ListViews
• storeMax() : CSimSummaryInfo
• storeMin() : CSimSummaryInfo
• storeValue() : CScanItem
• subType() : CEvaluationNode
• suffix() : CDirEntry
• suitableForStochasticSimulation() : CModel
• suitableFunctions() : CFunctionDB
• sumOfExponents() : CLyapTask
• sumOfSquares() : CExperiment
• sumOfSquaresStore() : CExperiment
• suspendAutoSave() : CopasiUI3Window
• swap() : CFunctionParameters , CCopasiParameterGroup , CCopasiVector< CType > , ObjectBrowserWidget
• swapNegativeNumbers() : CNormalTranslation
• swapOptItem() : COptProblem
• switch_streams() : CChemEqParser , yyFlexLexer , CEvaluationLexer , FlexLexer
• switchToBarChart() : CQArrayAnnotationsWidget
• switchToOtherWidget() : ListViews
• switchToTable() : CQArrayAnnotationsWidget
• sylvester() : CTSSAMethod
• sync() : CExperimentFileInfo , CSlider
• synchronizeEventOrder() : CModel